DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18814 and RGD1561812

DIOPT Version :9

Sequence 1:NP_652673.2 Gene:CG18814 / 59175 FlyBaseID:FBgn0042137 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_038936531.1 Gene:RGD1561812 / 503146 RGDID:1561812 Length:249 Species:Rattus norvegicus


Alignment Length:122 Identity:30/122 - (24%)
Similarity:55/122 - (45%) Gaps:14/122 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 IQINLVGVINSTLTALEYMDKSKGGRGGLIVNISSVAGLQPTPLMAIYSTSKTGVTTFTRAMASP 167
            :.:||:|||..||:.:..:.|::|.    :|||:||.. :.:.....|..||.||..|:.::...
  Rat    74 LDVNLLGVIEVTLSMVPSVRKARGP----VVNIASVMD-RVSSFGGGYCISKYGVEAFSDSLRRE 133

  Fly   168 IHYAHSGVGFITICPGYTNTGILKDIDKKTTFPFYETRMRTVFSKVKGQTAEVCARN 224
            :.|  .||....:.||:..|.:.......:.|       :.::.:...:..||...|
  Rat   134 LSY--FGVKVAIVGPGFFRTNMSNSAILSSNF-------QMLWDETSSEVREVYGEN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18814NP_652673.2 NADB_Rossmann 6..248 CDD:304358 30/122 (25%)
adh_short 6..196 CDD:278532 26/92 (28%)
RGD1561812XP_038936531.1 NADB_Rossmann <48..238 CDD:419666 30/122 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D553511at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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