DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18814 and Pdh

DIOPT Version :9

Sequence 1:NP_652673.2 Gene:CG18814 / 59175 FlyBaseID:FBgn0042137 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster


Alignment Length:257 Identity:98/257 - (38%)
Similarity:151/257 - (58%) Gaps:6/257 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLEGKNVVYLGGFGGIGKKCVQELLKKQIKGLAIFDLIVDDDLLAEWKK---QHPDTEIFYQKM 62
            |...|||.|..||.||||.:..::||......:||.||   .|.|.|:.|   .||...:...||
  Fly    18 MSFRGKNAVVTGGAGGIGLQVSKQLLAAGAAKVAIIDL---QDNLEEFVKLRAAHPTQSVMIIKM 79

  Fly    63 DITQKSDIDAAYKATAEKLGHFDVVVNGSGLLDDRRIELTIQINLVGVINSTLTALEYMDKSKGG 127
            |:..|..::|.|:..|:..|:.|:|||.:|:.:|:.::.|:.:||.|:|||||:||.||.|..||
  Fly    80 DVANKKGVEATYEEIAKTFGNIDIVVNVAGIFNDKDVQRTLLVNLGGIINSTLSALPYMGKDNGG 144

  Fly   128 RGGLIVNISSVAGLQPTPLMAIYSTSKTGVTTFTRAMASPIHYAHSGVGFITICPGYTNTGILKD 192
            :||::||:|||.||.|..::.:|..:|.|:..|||.:|:..:|..||:.|:|:|||.|.|.:..:
  Fly   145 KGGIVVNMSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVTVCPGATMTDMFTN 209

  Fly   193 IDKKTTFPFYETRMRTVFSKVKGQTAEVCARNIVNAIETAKNGAVLMLELGEIHELDIPNLW 254
            ..:|..||........:..::..|:|...:|.|:|.:|..|||||.::|...::.|:|...|
  Fly   210 FTEKIIFPETSDETYRILDRLNKQSAADVSRCILNVLEKDKNGAVYVIEGKRVYPLEIKPQW 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18814NP_652673.2 NADB_Rossmann 6..248 CDD:304358 93/244 (38%)
adh_short 6..196 CDD:278532 78/192 (41%)
PdhNP_524105.2 NADB_Rossmann 23..259 CDD:304358 92/238 (39%)
adh_short 23..214 CDD:278532 78/193 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455196
Domainoid 1 1.000 96 1.000 Domainoid score I2453
eggNOG 1 0.900 - - E2759_KOG4169
Homologene 1 1.000 - - H134459
Inparanoid 1 1.050 136 1.000 Inparanoid score I4534
Isobase 1 0.950 - 0.861353 Normalized mean entropy S2756
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1053465at2759
OrthoFinder 1 1.000 - - FOG0008550
OrthoInspector 1 1.000 - - mtm6395
orthoMCL 1 0.900 - - OOG6_100916
Panther 1 1.100 - - P PTHR44229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2961
1312.750

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