DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gdap2 and AT3G10210

DIOPT Version :10

Sequence 1:NP_724597.1 Gene:Gdap2 / 59173 FlyBaseID:FBgn0042135 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_566369.1 Gene:AT3G10210 / 820183 AraportID:AT3G10210 Length:237 Species:Arabidopsis thaliana


Alignment Length:1705 Identity:309/1705 - (18%)
Similarity:552/1705 - (32%) Gaps:575/1705 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GSSYEQHSECASDVQVTEAELP-----------EAARNLATFYYDEDVEQFETVQANPLASAILL 93
            |..:.|..|...|:|..|.:..           ||.|.|......:..||...::|.  ..|::.
plant    94 GEGHRQAKENEPDLQAVERQAAANRQKAEKRHREALRELKQHKEKQLREQTWLLKAR--RKALIT 156

  Fly    94 EKANA-----IPGPS-------KVLSRQF--VACCTEQFLTVAE------LAKRAGDDEESD--F 136
            ||..|     :|.|.       :|| |:|  |..|.....:|:.      ...|..|.|:.|  .
plant   157 EKERAAKIASLPPPPPDPLENIEVL-RRFPTVKLCNVDGFSVSHYHLPEPYVDRETDTEQPDARV 220

  Fly   137 APPQEYKAQSTIKPHNYSFTQMEIDTQMIDLFEAADLLTGPGIEK-----QPPKLPLPLSELLRA 196
            |..:|.|....:        |.|.:.:..:..|.|.|.....::|     ...||...|.::.:.
plant   221 AAEEEAKRLDAL--------QKEEERERRERMEKAHLRGSHALKKVLLTQDRDKLLKELEQMQQE 277

  Fly   197 DTDGKDTV----PSKLLSNTSINETSIKREE-------------PDAASDERSIVQRILDDFRLE 244
            |...:..|    |.:|.      |.:.:|||             .|..:.||    |:..|..|.
plant   278 DLAQRRQVVAQMPQQLF------EPAYRREEIQEEWQRELEVAFEDMYTGER----RVRGDMVLH 332

  Fly   245 ---------DSETCSMDVDLSLIQSESLRRRLIQLRDLITSPPKPVKREPTC--RQYGRAREKRE 298
                     .:|:...|:||| :..|.:..         |.|......||:.  :...::||.:.
plant   333 LKPQPLPVPSAESFDDDLDLS-VDPEPVCE---------TQPQTDAVEEPSHIEKTDDKSREPQS 387

  Fly   299 KLLARRL-----SYDTEDSSMAGQPSSDDESETSTIRNSNH------HSDTETSMDGMA-LNESV 351
            :::.:||     |...:.|:.:...:..|..|:.::.|..|      |...:.:.:|:. :::|.
plant   388 RIVFKRLLNKIRSQQDQWSAKSDVETQSDTVESGSLPNEIHTIHAELHEARKPAPEGIQNMSDST 452

  Fly   352 LIQANLTQLSAFFSQAITNSQEGGECREEKARNEPKSTSLDGEPAFHGFSSPISLASNRSSSPKT 416
            ::..|.....|  ::..|.:::..:..::....: |...||             |.:......|.
plant   453 ILAGNAVPRHA--TEPGTPTKQASDWNKQDLERQ-KQEQLD-------------LLNRLEEEKKR 501

  Fly   417 VALNFAMLSV----SDESSFLSVDDNHAE-------SVSEPITMEQLLDDDEDLFMLAHPAEE-- 468
            :...:..:.:    |.:......::...|       :|:||.|||:           ..||:|  
plant   502 LEAEYLRVQLQMQKSKQEGMEPPEEEEEEEAAVIPPAVTEPKTMEE-----------PKPAQEPP 555

  Fly   469 --------KEPHASDQKRV-QKITEGTNAAPIKSDANNEVHGSVNASLMPHSATSCRNATRDASI 524
                    :.||....::. |::.|                               :|.....|:
plant   556 GLSLNVSTESPHIQIIRQYQQRLIE-------------------------------QNRQHKQSV 589

  Fly   525 NDSDEVLLKAQAMFSEEEVKQKLNHLQNDSSIRESLQESVEMKAVPSV---------NANNAGKA 580
            .::.:.|.:.|.:     :|::.:|| :.|.::.:.:|.|.....|.:         :...|..:
plant   590 EEARQRLQEYQQL-----LKKRYSHL-SASRLQPAAKEPVSFAIKPGLAQKPAQHLEDIGGASDS 648

  Fly   581 HRRKIEEPVFSNQPFSGGFSTAGGSAIAISKKALESAQKMFAEEEAKLQNEMHVDDAKAPLGAAF 645
            |.|....|   .:..:|...:.|.|.|:   ....|.|.:||........|.. ....:||  ..
plant   649 HVRVTSYP---GESLAGHLVSLGSSLIS---AVPVSGQNLFAPSPVSRTAEFG-QSGSSPL--PH 704

  Fly   646 STAGGKSITVSKDAIEKARKTFEEDERTIGKDIVHDPLVTREGNPYQPTFLGGFSTAGGNTIAVS 710
            ||.....|..|...| ..::.:...|...||||..:.:    .:|.:.|.||.|        .:.
plant   705 STEQDNFIPYSSGTI-PTQQQYGGAESMTGKDIAANGI----KSPKRATPLGNF--------ILE 756

  Fly   711 KAALALAQKAFAEEETK---------MEQENITTANETSFGDGGFSTASGSKIAVSKRALESART 766
            .||..|.|...:.||..         :|:::.|::.      |.:.|||.|..     ||.|:.:
plant   757 VAAPRLEQYTSSPEEDSISPPYSMYDLEKQSSTSSK------GDYDTASDSFY-----ALPSSLS 810

  Fly   767 MFAQEEGEGTDQ-PQT-TVD----GGFKPP---AMGFSFSTASGN-----------KIAVSKKAL 811
            :...:..|..:| |.. .||    |.|...   ..|...|||...           ::.:.:::|
plant   811 LGLPQNIENIEQEPHVQKVDSVPFGEFSNVHEFRKGLISSTAKMQAQQTQLRDMQLQLEMQRESL 875

  Fly   812 EKAQKTFE--------EIESMV--------------DNATGVEAAGSCQKVSGTCIENESKEVRN 854
            ...||:.|        |:|..:              ::|.|......||             :.|
plant   876 LSKQKSQEEGLLQKQKELEDQMRKHQESLEHFLANKESAQGALPPDLCQ-------------ISN 927

  Fly   855 CDNLRPDLMGA------------FSTASGSSIAVSKKALK--------TAQKM---FEEEELS-- 894
            .:.||  ||.|            .|..:|||:..:.:.||        |..|:   .|:.|||  
plant   928 NERLR--LMSALLKALGDGKQENLSLGNGSSLRAAGRELKGRPSKPPVTKTKLGPSLEQHELSAI 990

  Fly   895 --------RDKENQPGNMTNDSFGGGFSTAGG------------------GKISVSKEALERAQK 933
                    |.....|....|.|.|......||                  |..|:....|.|...
plant   991 LEVETPSGRPSSTGPPEHKNSSSGRQDGAEGGNSSVPPACMQENSRLREAGNYSLGDPDLSRTST 1055

  Fly   934 AFAEEEASKSALE----------NTGNRNSPDFAASFSTAAGSAI----AVSKKALQMAQKAFDE 984
            :..|...|::.|.          ::.|...||  .|:|::..|.:    |.:|.|....|.|.:.
plant  1056 SSNESNRSQTKLSWRQMLSLAAASSHNLTLPD--QSWSSSVHSGLSPHPAGTKTAFHFQQPAQER 1118

  Fly   985 DD-LGPVVDKENITGNLLGGFNTASGSKISVSKKALENAKKFFTEEEEEKVTECTTVISKDACTI 1048
            .| ||                 .|...|..:...|...|::.|::.     ...||:.:....|.
plant  1119 SDWLG-----------------AAELGKTGIGYSAQTQAREAFSDH-----LSTTTISTGSFLTS 1161

  Fly  1049 DHVEESVTSFPT--------FSRASGAS-------------------------IAISTDALERAK 1080
            :..:.|:::..|        ||..:||.                         ::.:.|.....:
plant  1162 EKADSSISNLETISDLHKCNFSIINGAEHGNWSTSVNGVPQPTRRDEFPSPEYLSTAPDQRSHIQ 1226

  Fly  1081 KLWNEF---------------------DEAESKEPLPAG---------CNDAAISDSVLGENAPK 1115
            ::.:::                     |.:.:...||:|         .|.:..|.|.|......
plant  1227 QIIDKYTRDLSASLERNLSFHTPTAALDVSGNDNHLPSGFYALEPKPDFNVSTTSHSQLNNTGSS 1291

  Fly  1116 LE------------------ETRHKRRLSHAHDEPILTP------------KKKLR-------SN 1143
            .|                  |..|..:...:...|:.:|            ...:|       |.
plant  1292 QESKNTSQSSFYPSSKEWSSEQSHSFQYPDSSHSPMSSPGITSAQHVDVEITPHVRGDQTLGSSG 1356

  Fly  1144 HLHPLVPFQT------STP-----ASAVGESVRPTTKQTKEPTPQAHDVDAFFSQLDDHEFQQLF 1197
            ..|||.|..|      |:|     :|||.:....:.|.:|:...|:..||:              
plant  1357 SFHPLHPECTLNEPPLSSPGLCGCSSAVDDLGNGSMKASKQHALQSSSVDS-------------- 1407

  Fly  1198 CVQQMGK-KPNKLLSKFDQCSDAIPAKPAAKMQPAGSDWDDSFSEILPNLPASDESDGKRRSVLV 1261
                 |. ..|.....|....:.:.|.....::..|     ||.|::.....::||:       :
plant  1408 -----GNWNTNSSPGAFQPSVEPLRADSHTLLEDLG-----SFHELMATETTANESE-------L 1455

  Fly  1262 SHLP------PEHVQQARREELGKQVQYIESKPADACRPRLFEFCSRKQQKNRVAIREFVG-GAV 1319
            |..|      .:|....:..||  .|.|...:||:.                ..::.::.| |:|
plant  1456 SEHPLTAVGKTKHGDSQQLHEL--PVLYEALEPAEI----------------EASVGDYPGLGSV 1502

  Fly  1320 PR------SADVLTAAMNVTLENVLEFRFNVAEYYGESVSISNTAGIPLGTDGKAGCLLMDANST 1378
            |:      .|:|.::::.:..:.:.|...:|   :.:|.|..:::...||:..    ||.|.::.
plant  1503 PQHSNGDEGAEVESSSLTLKSDTLTEAESSV---HPDSSSAISSSAFSLGSFS----LLRDTHNA 1560

  Fly  1379 IGV-EEMRCAFLAAP 1392
            .|: ||...:.::.|
plant  1561 RGIMEEPELSLVSFP 1575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap2NP_724597.1 Macro_GDAP2-like 67..234 CDD:394876 44/210 (21%)
CRAL_TRIO_2 393..524 CDD:463965 18/152 (12%)
AT3G10210NP_566369.1 CRAL_TRIO_2 64..190 CDD:463965 24/98 (24%)

Return to query results.
Submit another query.