DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap2 and Macrod2

DIOPT Version :10

Sequence 1:NP_724597.1 Gene:Gdap2 / 59173 FlyBaseID:FBgn0042135 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001393313.1 Gene:Macrod2 / 72899 MGIID:1920149 Length:476 Species:Mus musculus


Alignment Length:305 Identity:89/305 - (29%)
Similarity:135/305 - (44%) Gaps:33/305 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VKLDNLATWGGSQKTDTRLPITDYSNLGGPRHNRSPFP-LCKDVNNRFVIWDGDMTTLEVDAITN 86
            |.|..:.:|....|:..:          ....|....| :.|.::.:..::.||:|.||||||.|
Mouse    35 VSLSTILSWKEEMKSKGQ----------NDEENTQEAPQMKKSLSEKVSLYRGDITLLEVDAIVN 89

  Fly    87 TSDETLTESNSISERIFAVAGNQLREELSTTVKECRTGDVRITRGYNLPAKYVLHTVAPAYREKF 151
            .::.:|.....:...|...||..|..| ...:..|.||..:||.||:||||||:|||.|..|...
Mouse    90 AANASLLGGGGVDGCIHRAAGPCLLAE-CRNLNGCETGHAKITCGYDLPAKYVIHTVGPIARGHI 153

  Fly   152 KTAAENTLHCCYRNVLCKAKELNLHTIALCNISAHQKSFPADVAAHIALRTIRRYLDKCTLQV-- 214
            ..:.:..|..||::.|...||.||.::|...||.....||.:.||.|||.||:.:|.|...:|  
Mouse   154 NGSHKEDLANCYQSSLKLVKENNLRSVAFPCISTGIYGFPNEPAAVIALGTIKEWLAKNHQEVDR 218

  Fly   215 VILCVGSSERGTYEVLAPLY-------FPRDQLEERSALWQLPKDIGGEFGEPQHPDPDRQIRII 272
            :|.||      ..||...:|       ||.|...|.:.. .:.:|..|.  ||:...|..:....
Mouse   219 IIFCV------FLEVDFKIYKKKMNEFFPVDDNNEGTDA-DMKEDSEGP--EPKGLSPPHKKSKA 274

  Fly   273 RNPQHSVHMRHHLADDDSDVSPHDMEGNSSD---LEYGARDMNGL 314
            :.|:.|.......:..:...:..:|||.|.:   |.:..|::.||
Mouse   275 KKPESSKDSSEDESGPEEKQTAEEMEGQSQEAGGLRFLLRNLLGL 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap2NP_724597.1 Macro_GDAP2-like 67..234 CDD:394876 62/168 (37%)
CRAL_TRIO_2 393..524 CDD:463965
Macrod2NP_001393313.1 Macro_OAADPr_deacetylase 71..237 CDD:438955 63/172 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..306 14/67 (21%)
Blue background indicates that the domain is not in the aligned region.

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