DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap2 and macrod1

DIOPT Version :10

Sequence 1:NP_724597.1 Gene:Gdap2 / 59173 FlyBaseID:FBgn0042135 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001004573.2 Gene:macrod1 / 447834 ZFINID:ZDB-GENE-040912-100 Length:327 Species:Danio rerio


Alignment Length:203 Identity:74/203 - (36%)
Similarity:110/203 - (54%) Gaps:8/203 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LPITDYSNLGGPRHNRSPFPLC---KDVNNRFVIWDGDMTTLEVDAITNTSDETLTESNSISERI 102
            :|:.|.. :..|..:.|..|.|   :::|.:..::.||:|.||:||:.|.:::||.....:...|
Zfish   119 IPLEDVP-VWSPSGDSSCKPRCEVNEELNMKVSLFGGDITKLEIDAVANAANKTLLGGGGVDGAI 182

  Fly   103 FAVAGNQLREELSTTVKECRTGDVRITRGYNLPAKYVLHTVAPAYREKFKTAAENTLHCCYRNVL 167
            ...||..||:|.: |:..|.||:.:||..|.|||:||:|||.|...:......|..|..||.|.|
Zfish   183 HRGAGPLLRKECA-TLNGCETGEAKITGAYGLPARYVIHTVGPIVHDSVGEREEEALRNCYYNCL 246

  Fly   168 CKAKELNLHTIALCNISAHQKSFPADVAAHIALRTIRRYLDKC--TLQVVILCVG-SSERGTYEV 229
            ..|.:.:|.|:|...||.....:|.|.|..:||:|:|.||::.  .|..||.||. .|::..||.
Zfish   247 HTATKHHLRTVAFPCISTGVYGYPPDQAVEVALKTVRDYLEQNPEKLDRVIFCVFLKSDKQLYEN 311

  Fly   230 LAPLYFPR 237
            |.|.||||
Zfish   312 LLPAYFPR 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap2NP_724597.1 Macro_GDAP2-like 67..234 CDD:394876 63/169 (37%)
CRAL_TRIO_2 393..524 CDD:463965
macrod1NP_001004573.2 Macro_OAADPr_deacetylase 148..314 CDD:438955 62/166 (37%)
Blue background indicates that the domain is not in the aligned region.

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