DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap2 and Gdap2

DIOPT Version :10

Sequence 1:NP_724597.1 Gene:Gdap2 / 59173 FlyBaseID:FBgn0042135 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_034399.1 Gene:Gdap2 / 14547 MGIID:1338001 Length:498 Species:Mus musculus


Alignment Length:523 Identity:204/523 - (39%)
Similarity:315/523 - (60%) Gaps:45/523 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VKLDNLATWGGSQKTDTRLPITDYSNLGGPRH----NRSPFPLCKDVNNRFVIWDGDMTTLEVDA 83
            |.:|.|.:||.|.:.:     .|.::......    :||||...:|||.:.|:|.||:..|...|
Mouse    11 VDVDTLLSWGDSYEDE-----VDCADSTAEAFQEDASRSPFVYSRDVNGKVVLWKGDVALLNCTA 70

  Fly    84 ITNTSDETLTESNSISERIFAVAGNQLREELSTTVKECRTGDVRITRGYNLPAKYVLHTVAPAYR 148
            |.|||:|:||:.|.:||.||.:||..|:|:|. .:|.||||:.::|:|:||.|::::|||.|.|:
Mouse    71 IVNTSNESLTDKNPVSESIFMLAGPDLKEDLQ-KLKGCRTGEAKLTKGFNLAARFIIHTVGPKYK 134

  Fly   149 EKFKTAAENTLHCCYRNVLCKAKELNLHTIALCNISAHQKSFPADVAAHIALRTIRRYLD--KCT 211
            .:::||||::|:.||||||..|||.::.::..|.|::.::.:|.:.|.||||||:||:|:  ...
Mouse   135 SRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDATHIALRTVRRFLEIHGEN 199

  Fly   212 LQVVILCVGSSERGTYEVLAPLYFPRDQLEERSALWQLPKDIGGEFGEPQHPDPDRQIRIIRNPQ 276
            ::.|:..|...|..||:.|.||||||...||..:|..||.|||...|||  ..|:|||||...|.
Mouse   200 IEKVVFAVSELEEATYQKLLPLYFPRSLKEEIRSLPYLPADIGNAEGEP--VVPERQIRISEKPG 262

  Fly   277 HSVHMRHHLADDDSDVSPHDMEGNSSDLEYGARDMNGLSLNSYSSGLQAQLQRDLDRQHLLSDRP 341
                     |.:|::....| ||...||.:         :.|::.   |:::.|:|:|..|    
Mouse   263 ---------ASEDNEEEDED-EGLGVDLSF---------IGSHAF---ARMEGDIDKQRKL---- 301

  Fly   342 RTGVYENVISEGVEGIEHQERYERLLRRAQVEDLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPA 406
               :.:..:||.....:||..|.|.|.:|:.|||::::.:..|||:|||..||.|:|..|:..|.
Mouse   302 ---ILQGQLSEAALQKQHQRNYNRWLCQARSEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPV 363

  Fly   407 QNIDLEKALLYLIKLLDPIVKGDYVISYFHTLTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIV 471
            ..||::|||||.|.::|.|...:||:.|||||||..|:....:|:::|.|:..|||:||||.|.|
Mouse   364 TLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFV 428

  Fly   472 HPTFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEYDMATNGLHY--FN 534
            ||||.:|:.||:||||....:|.|:|.:..::.|:|||:.:|::.|.::.|||...||.::  :.
Mouse   429 HPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDARENGPYFASYP 493

  Fly   535 PVP 537
            |.|
Mouse   494 PSP 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap2NP_724597.1 Macro_GDAP2-like 67..234 CDD:394876 72/168 (43%)
CRAL_TRIO_2 393..524 CDD:463965 59/130 (45%)
Gdap2NP_034399.1 Macro_GDAP2-like 55..222 CDD:394876 72/168 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 248..275 8/26 (31%)
CRAL_TRIO_2 350..481 CDD:463965 62/130 (48%)

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