Protein Alignment Capr and Caprin1

DIOPT Version :10

• Sequence 1: NP_652671.1
• Gene: Capr / 59172
• FlyBaseID: FBgn0042134
• Length: 961
• Species: Drosophila melanogaster
• Sequence 2: XP_038961366.2
• Gene: Caprin1 / 362173
• RGDID: 1305707
• Length: 720
• Species: Rattus norvegicus
• Alignment Length: 893
• Identity: 220/893 - (24%)
• Similarity: 327/893 - (36%)
• Gaps: 249/893 - (27%)

  Fly     6 NTATVTAAIATTVAASASNTNNNSVSKEKRSSIISLGGSVIPGTAVAAGAGVATTNGQSNSSAAA 70
            |.|.:.|||.|..:|:   :::.|.||                     .:|....:|.|.|.|||
  Rat     3 NEARMHAAIRTMPSAT---SHSGSGSK---------------------SSGPPPPSGSSGSEAAA 43

  Fly    71 TADGSQTDLASSNNNGNAAKSKANAVSAAAVVPEPYNPLKQLLVTIEHKIRNLEKRKTKLESYRA 135
            .|              .|..|:..|....||..|   .:||:|..|:.|:|||||:|.||:.|:.
  Rat    44 GA--------------AAPASQHPATGTGAVQTE---AMKQILGVIDKKLRNLEKKKGKLDDYQE 91

  Fly   136 IQSSGKELSGDQASAVAKYDAVLANLEFARELAKHIQQQSKEAEKEQKKQARKDNLAKTIAETAK 200
            ..:.|:.|:.||..||:||..|..|||||:||.:.....|::.:|..||.||::.|.:..||..:
  Rat    92 RMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKR 156

  Fly   201 IREVLIIQNVLNCFNDDQVRSDFLNGENGAKKLENTELELLEKFFIETQTRRPETADDVSFIATA 265
            ::.||.:|.||:...||.||:|...|.:|...|...||.||::|:......|     |:|.....
  Rat   157 LKTVLELQYVLDKLGDDDVRTDLKQGLSGVPILSEEELSLLDEFYKLVDPER-----DMSLRLNE 216

  Fly   266 Q-KSAEL-FYSTINARPKSFGEVSFEKLRSLFQQIQDSGYLDKYY-------------LVPLAEN 315
            | :.|.: .:..:..:.|.....:::.|:.:.:::..|.|.|..:             ..|:.|:
  Rat   217 QYEHASIHLWDLLEGKEKPVCGTTYKALKEIVERVFQSNYFDSTHNHQNGLCEEEEAASAPIVED 281

  Fly   316 AVANS----TDSGTGSGDGESGDLLNDGSGELDAELPSEPSARNSLEEGLDKLHLGVQAELDQHQ 376
            .||.:    |:..|...:.||.:.:|       .:..:|....:..:|.:|:..:   ..::...
  Rat   282 QVAEAEPEPTEEYTEQSEVESTEYVN-------RQFMAETQFSSGEKEQVDEWAV---ETVEVVN 336

  Fly   377 SYQQQQERPS------HLLEPQHQRAPSLEHQQNSMVQQVSTQV---YQAAPQA-----GGTTTP 427
            |.|||.:..|      |.|.|..|..|.:..|:   ||.:..|:   |.....:     ..|..|
  Rat   337 SLQQQPQAASPSVPEPHSLTPVAQSDPLVRRQR---VQDLMAQMQGPYNFIQDSMLDFENQTLDP 398

  Fly   428 VHVLYAPAPPAQ--QQPQQPPPHPH---QLLSS---PVNLQALQTG---------TAAPPAQQQQ 475
            ..|...|..|.|  ..||...|..|   :|..|   ||..:|.|..         ||:.|..|
  Rat   399 AIVSAQPMNPTQNMDMPQLVCPQVHSESRLAQSNQVPVQPEATQVPLVSSTSEGYTASQPLYQ-- 461

  Fly   476 PHPTHFAPNVRAVEQNYFKQPPQHPQGP-GIQAPQTPQQQQFMQHSRPLAEVLGTGRFHFLQDSE 539
              |:|      |.||...|:|....|.. .:...||.........|:|  :|...|....|..|.
  Rat   462 --PSH------AAEQRPQKEPIDQIQATISLNTEQTTASSSLPAASQP--QVFQAGASKPLHSSG 516

  Fly   540 LDNPEAL------------APPPPTNQGLVFEQQPQ-QPNHVEEPTQAILTLTFTNQSFPSQQPQ 591
            : |..|.            ||.||.|:....:||.| |.::              |||| |.||.
  Rat   517 I-NVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQSQYQASY--------------NQSF-SSQPH 565

  Fly   592 PQQQGPQQQQQLFSPVLIHEQRQQPPQQQPQPMLIMPRLPTQQPQQPAPQGIGMQAGDVTSGFSY 656
            ..:|...||.||.:.|..:...|..|.|.|           ...|||..|..|..    .|...|
  Rat   566 QVEQTELQQDQLQTVVGTYHGSQDQPHQVP-----------GNHQQPPQQSTGFP----RSSQPY 615

  Fly   657 ENAVVSYEQQIQQQLKQQQQQQQQQQQNLQQLDEPSSVNSSSSVGAGGDVENNEWHARNNDTNAA 721
            .|:                                ..|:...|.||.|
  Rat   616 YNS--------------------------------RGVSRGGSRGARG----------------- 631

  Fly   722 ATAALTNVLKGETTQATPPAPPTKWSSEMNAMSSAASNGSSNTSHKQEWATPRDHSTGGGNSGYA 786
                |.|..:|         |...:....:...|:.||..::...:.::..|||:      |||
  Rat   632 ----LMNGYRG---------PANGFRGGYDGYRSSFSNTPNSGYTQSQFNAPRDY------SGY- 676

  Fly   787 DNNESNNHWNNSQGDGRRNSGNYQRRGGDRDNRDRDQGGRGDERRNGG 834
                        |.||.:.  |::|..|....|...:|..|..|.|.|
  Rat   677 ------------QRDGYQQ--NFKRGSGQSGPRGAPRGRGGPPRPNRG 710

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Capr	NP_652671.1	PRK12704	<109..>199	CDD:237177	39/89 (44%)
		Caprin-1_dimer	187..305	CDD:436391	31/119 (26%)
		PRK11634	<802..858	CDD:236941	10/33 (30%)
Caprin1	XP_038961366.2	None