DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18810 and AT4G24630

DIOPT Version :9

Sequence 1:NP_652670.2 Gene:CG18810 / 59171 FlyBaseID:FBgn0042133 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_194194.2 Gene:AT4G24630 / 828565 AraportID:AT4G24630 Length:407 Species:Arabidopsis thaliana


Alignment Length:321 Identity:77/321 - (23%)
Similarity:112/321 - (34%) Gaps:122/321 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FILCG----------LPAIYYVLMEIILP--------------ELSDYWSPGYVFQLLLGLFLFS 62
            |||.|          ||   ..|:.||:|              |.|.| :.||...::..||.. 
plant    15 FILGGRLIFGPDARSLP---LTLLLIIVPVVLFCVFVARHLRHEFSPY-NAGYAIMVVAILFTI- 74

  Fly    63 NVMSNYVMCILV-----DPSIDPK----------------------------LMKNQLVRGQHSE 94
                 ||:.:|.     ||.|.|:                            ..|..:|.|. |.
plant    75 -----YVLILLFFTSARDPGIVPRNSHPPEEDLRYETTVSADGRQTPSVQIPRTKEVIVNGV-SV 133

  Fly    95 DWHECDKCGILAPPRSRHCRKCGVCVLMRDHHCFFTGCCIGHENYRYFFYFLIYFFLSCMISLTS 159
            ....||.|.:..|||..||..|..||...||||.:.|.|||..||||||.|:....|.|:...:.
plant   134 RVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSSTLLCIYIFSM 198

  Fly   160 SSIFIYVLHGGRYQLFMLTHPAPNSAYFNSLIIRIIYFKLPDIYELVFTLVFVLLW-IGVCVATY 223
            |:::|.:|..  :|...:......|.:   .::.:||             .|:.|| :|...|.:
plant   199 SAVYIKILMD--HQQATVWRAMKESPW---AVVLMIY-------------CFIALWFVGGLTAFH 245

  Fly   224 V--------AYDQ------------WSRG-------YFCYDFELQNIPFDRKLRRNFKTFL 257
            :        .|::            ::||       .||...        :..|.||:.|:
plant   246 LYLISTNQTTYEKLRYRSSHSRSIVYNRGCPNNFLEVFCSKV--------KPSRNNFRAFI 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18810NP_652670.2 zf-DHHC 92..>138 CDD:303066 20/45 (44%)
AT4G24630NP_194194.2 zf-DHHC 136..261 CDD:279823 41/142 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.