DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18810 and Patsas

DIOPT Version :9

Sequence 1:NP_652670.2 Gene:CG18810 / 59171 FlyBaseID:FBgn0042133 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster


Alignment Length:301 Identity:70/301 - (23%)
Similarity:107/301 - (35%) Gaps:90/301 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FLFLF--ILCGLPA--------------------IYYVLMEIILPELSDYWSPGYVFQLLLGLFL 60
            |||||  :|.|.|.                    ||:..:..|...:::...|||:         
  Fly   369 FLFLFSVLLWGYPMYMIRAIPITWNILRRSHYCFIYWNAVMWISWAIANRRDPGYI--------- 424

  Fly    61 FSNVMSN--YVMCILVDPSIDPKLMKNQLVRGQHSEDWHECDKCGILAPPRSRHCRKCGVCVLMR 123
               .:|:  |...|...|..| ||.|..::..:      .|..|..|.|.|::|||.|..||...
  Fly   425 ---PLSSDAYYRAIKQIPYFD-KLKKRNVMLTR------LCHSCRCLRPLRAKHCRVCNRCVSYF 479

  Fly   124 DHHCFFTGCCIGHENYRYFFYFLIYFFLSCMISLTSSSIFIYVLHGGRYQLFMLTHPAPNSAYFN 188
            ||||.|...|:|..|..:||.|::...::|..::                            ||.
  Fly   480 DHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTI----------------------------YFA 516

  Fly   189 SLIIRIIYFKLPDIYELVFTLVFV-LLWIGVCVATYVAYDQWSRGYFCYD------FELQNIPFD 246
            ...:.|..|.:..:..|:..:||. |.||..|.:...|         |.:      |..:..|:.
  Fly   517 CYCVMIEGFTMLYVLGLIEAVVFCGLGWILTCTSILHA---------CMNLTTNEMFNYKRYPYL 572

  Fly   247 RKLRRNFKTFLGRRMKWTWISGFV--PSQLDHDGFDLDPDN 285
            |..|..::....|......:..||  |.:.|.:...|: ||
  Fly   573 RDKRGRYQNPFSRGPILNLLEFFVCLPDRGDDNDLLLE-DN 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18810NP_652670.2 zf-DHHC 92..>138 CDD:303066 18/45 (40%)
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 37/148 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467591
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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