DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18810 and Zdhhc3

DIOPT Version :9

Sequence 1:NP_652670.2 Gene:CG18810 / 59171 FlyBaseID:FBgn0042133 Length:300 Species:Drosophila melanogaster
Sequence 2:XP_038937239.1 Gene:Zdhhc3 / 301081 RGDID:1309041 Length:350 Species:Rattus norvegicus


Alignment Length:336 Identity:77/336 - (22%)
Similarity:124/336 - (36%) Gaps:96/336 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FLFLFILCGLPAIYYVLMEIILPELSDYWS--PGYVFQLLLGLFLFSNVMSNYVMCILVDPSIDP 80
            ||.|:      |.:.||..:::|.....:|  .|.||.||..|     .::::...:|.||...|
  Rat    53 FLVLY------AEFVVLFVMLIPSRDYAYSIINGIVFNLLAFL-----ALASHCRAMLTDPGAVP 106

  Fly    81 K-------LMKNQLVRGQHSEDWHECDKCGILAPPRSRHCRKCGVCVLMRDHHCFFTGCCIGHEN 138
            |       :...||..||..   ::|.||..:.|.|:.||..|..|:...||||.:...|:|..|
  Rat   107 KGNATKEFIESLQLKPGQVV---YKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENN 168

  Fly   139 YRYFFYFLIYFFLSCMISLTSSSIFIYVLHGGRYQLFMLTHPAPNSAYFN--SLIIRIIYFKLPD 201
            .:||..|.:|      |:|.|....|.|   |.:.|..........:.|:  :.:|.:|..    
  Rat   169 QKYFVLFTMY------IALISLHALIMV---GFHFLHCFEEDWTKCSSFSPPTTVILLILL---- 220

  Fly   202 IYELVFTLVFVLLWIGVCVATYVAYDQWSRGYFCYD----FELQNIPFDRKLRRNFKTF---LGR 259
            .:|.:..|:|..:..|..|.:           .|.|    ..||.....|:...::|:.   .|.
  Rat   221 CFEALLFLIFTSVMFGTQVHS-----------ICTDETGIERLQRSKQPREQSGSWKSVQEAFGG 274

  Fly   260 RMKWTWISGF-------VP------------SQLDH---------DGFDLDP-DNERV------- 288
            .....|.:.|       :|            |.:|:         :..|.|| :.::|       
  Rat   275 EFSLNWFNPFTRPCQPEIPIDKGLVRQVSSLSNMDNVETAEGQLEETKDRDPVEEDQVQCELCHI 339

  Fly   289 ----ADWCSET 295
                :.||.:|
  Rat   340 RAGGSGWCKKT 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18810NP_652670.2 zf-DHHC 92..>138 CDD:303066 15/45 (33%)
Zdhhc3XP_038937239.1 DHHC 128..253 CDD:396215 37/148 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.