DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18810 and pfa3

DIOPT Version :10

Sequence 1:NP_652670.2 Gene:CG18810 / 59171 FlyBaseID:FBgn0042133 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_595701.1 Gene:pfa3 / 2540463 PomBaseID:SPBC2F12.15C Length:329 Species:Schizosaccharomyces pombe


Alignment Length:292 Identity:68/292 - (23%)
Similarity:113/292 - (38%) Gaps:39/292 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CGLPAIYYVLMEIILPELSD--YWSPGYVFQL------LLGLFLFSNVMSNYVMCILVDP----- 76
            |.|..:....|:||...|..  .|....::::      ::.|||:..:::.||:..|..|     
pombe    13 CVLVILAKYCMQIIALSLMSGVQWLAWGIYKINKNRVGIIILFLYIMIVTCYVLTNLTPPGSPSE 77

  Fly    77 -SIDPKLMKNQLVRGQHSEDWHECDKCGILAPPRSRHCRKCGVCVLMRDHHCFFTGCCIGHENYR 140
             |.||...: |.:..|:.:. ..|:||......||.||.:|..|:|..||||.:...|:|..|::
pombe    78 TSFDPNSTR-QYMTLQNGKS-RFCEKCQEYKCDRSHHCSQCNKCILRMDHHCMWFKNCVGFRNHK 140

  Fly   141 YFFYFLIYFFLSCMISLTSSSIFI---YVLHGGRYQLFMLTHPAPNSAYFNSLIIRIIYFKLPDI 202
            :||....|..|..:..|.|:.:.|   :...|.......|       .::..|....:..   .|
pombe   141 FFFLECFYLNLYSICVLYSTFVAITKTFTAEGANISAIYL-------VFWGFLFAFAVGM---SI 195

  Fly   203 YELVFTLVFVLLWIGVCVATYVAYDQWSRGYFCYDFELQNIPFDRKLRRNFKTFLGRRMKWTWIS 267
            ....||.....|.|............|||    |....|  ||:.....|:...:| :..:.|:.
pombe   196 VMTAFTFYHTSLLIHNLSTLESMSSSWSR----YTHSTQ--PFNVGWYENWCQIMG-KSPFLWLL 253

  Fly   268 GFVPSQLDHDGFDLDPDNERVADWCSETTIKD 299
            .| |:.:. :|.:. |.|.....:..:|..|:
pombe   254 PF-PNSIG-EGVEY-PLNANALPYLPQTEEKN 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18810NP_652670.2 DHHC 92..>138 CDD:418707 16/45 (36%)
pfa3NP_595701.1 COG5273 1..300 CDD:227598 68/292 (23%)

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