DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18809 and Trir

DIOPT Version :10

Sequence 1:NP_652669.1 Gene:CG18809 / 59170 FlyBaseID:FBgn0042132 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001099416.1 Gene:Trir / 288920 RGDID:1564093 Length:173 Species:Rattus norvegicus


Alignment Length:197 Identity:70/197 - (35%)
Similarity:86/197 - (43%) Gaps:62/197 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 LAREGKVYPPPKPEPP----------------------------SHPV------FANDGSFMELF 234
            :|..|:...||..|.|                            |.||      |||||||:|||
  Rat     1 MAARGRRAEPPGREAPGPAGSGRSRWAESGPGTSPESGDDEVSGSSPVSSGVNLFANDGSFLELF 65

  Fly   235 K-KMQEGQKQQATSQLMQPSVKEVLQQQLVPPEAASTGPALPAIALGAASSAAAPYIAAAAAGKL 298
            | ||:|.|:|               :|:..||     ||..|.   ..||:||.|.......|. 
  Rat    66 KRKMEEEQRQ---------------RQEEPPP-----GPQRPD---QPASAAAGPGNQKRKGGP- 106

  Fly   299 APPPPIVGRRRGGK--VLKTGVVA-KVKTPNESDVDPKDFWSLYLAEVNKYKSNACDTDNGKRPL 360
            .|....||:||||.  .||||:|| |.||.:|......|.|:.|:|||.|||::.|..|:..|||
  Rat   107 GPTFSFVGKRRGGNKLALKTGIVAKKQKTEDEVLTSKGDAWAKYMAEVKKYKAHQCGDDDKTRPL 171

  Fly   361 VK 362
            ||
  Rat   172 VK 173

Return to query results.
Submit another query.