DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18808 and VF13D12L.3

DIOPT Version :9

Sequence 1:NP_652668.1 Gene:CG18808 / 59169 FlyBaseID:FBgn0042131 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_496500.1 Gene:VF13D12L.3 / 174795 WormBaseID:WBGene00012149 Length:400 Species:Caenorhabditis elegans


Alignment Length:354 Identity:134/354 - (37%)
Similarity:206/354 - (58%) Gaps:9/354 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DTSLVLVDEARRFIQDCLLRVGVSPSKVRCISEFLVVADYRGNYGSGLNRLDYYLSDLQSGHAKV 94
            :.|:|..||.:||:.:|:.:||.:.|....::..|:..|.||:|..||||||.|:.|::....|.
 Worm    45 EESVVAKDEMKRFMVECMTKVGATESHATQLALVLLEGDIRGHYSHGLNRLDMYVRDIEQNVCKG 109

  Fly    95 GAEPSIISETVSTAHVNGNSALGVFVGNFCMDLAVKKAEDSGIGFVVAQQSHDIGMASWFTFRAA 159
            ..||.|:.|...||.|:||:.||..|||||||||::||:::|||:|||:.|:..|:|.|:..||.
 Worm   110 DGEPIILKEKAGTAWVDGNNLLGPVVGNFCMDLAIEKAKNAGIGWVVAKGSNHYGIAGWYALRAM 174

  Fly   160 GKGLAGIVMSNSAPTMMGPNSKSASIGSNCFAFCVKGE-EYHFVLDMATSVKDIGAVEWAWANDE 223
            .||:.|:.|:|::|......|...::|:|..:....|. :..||||||::...||.||.|...:.
 Worm   175 KKGMLGMSMTNTSPISFPTRSAVPALGTNPISLAAPGTGDDSFVLDMASTTVAIGKVELAARKEN 239

  Fly   224 YIPHGWAANEGGLSTCFPSLALRTPLLFP------AGGHKGYCLSAVIDILCGVLSGAQYATHIT 282
            .:|..|...|||..|..|:..|....|.|      :||:|||.||::|:|.||:|:||.:..|:.
 Worm   240 PVPLSWGVGEGGKETTDPTKVLYGGGLLPLGGVEVSGGYKGYGLSSMIEIFCGILAGAHWGPHVR 304

  Fly   283 --MDQNQPSNLGQVFIALDPEFFLPNFMERFDDFCGRIQNSQPADDSEPIRLPGELERMHMNYVE 345
              |.....::|||.|:|:|||.|.|.|.:|..||...::....:..|..:.:.|::||.|...||
 Worm   305 KWMSTKSEADLGQCFVAIDPEAFAPGFADRLQDFMQTMRALPTSSPSFKVEVAGDMERRHEALVE 369

  Fly   346 DLRALAYPNSLLTKYKEVAERLCVKPIEL 374
            .|..:.|..:.:|...::|.:|.||.::|
 Worm   370 QLGGIPYHKNQITFVNDLAAKLGVKTVDL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18808NP_652668.1 Ldh_2 38..341 CDD:280734 120/311 (39%)
VF13D12L.3NP_496500.1 Ldh_2 53..379 CDD:280734 125/325 (38%)
PLN00105 54..375 CDD:215057 123/320 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159223
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60886
OrthoDB 1 1.010 - - D1122265at2759
OrthoFinder 1 1.000 - - FOG0008534
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104354
Panther 1 1.100 - - O PTHR11091
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.720

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