DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and tsgA

DIOPT Version :10

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_417823.1 Gene:tsgA / 947869 ECOCYCID:EG11262 Length:393 Species:Escherichia coli


Alignment Length:363 Identity:74/363 - (20%)
Similarity:127/363 - (34%) Gaps:106/363 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 TQSLVVMAFYAGYVLSHV------PGGRLAERYGGKWVLSAAILTS----AVLTLLTP--TAVRQ 191
            |.:||::   .|.|:.::      |...::..:   ..|:|.||.|    |.|..:.|  |.:|.
E. coli    20 TGALVIV---TGMVMGNIADYFNLPVSSMSNTF---TFLNAGILISIFLNAWLMEIVPLKTQLRF 78

  Fly   192 GGLYALVAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMV----QLVSGL 252
            |.|..::||..|:.......|.|...:|         |:::...:|.|...:|.:    |..|.|
E. coli    79 GFLLMVLAVAGLMFSHSLALFSAAMFIL---------GVVSGITMSIGTFLVTQMYEGRQRGSRL 134

  Fly   253 LIAEQDWPVFFYLVG-----------GGAVAWF-----LGFTLVCYSTPDHCPFIQSEEREYIRC 301
            |..:.    ||.:.|           ..::.|:     :|...|..                   
E. coli   135 LFTDS----FFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAI------------------- 176

  Fly   302 NTSNSFLLTTGREREEMDGEDGYEGEDREHRREVEATCNTAPWRSMLNSTPLWALVSTSMQQEFQ 366
                 |:||.|.|...:.          :|..:.:|......|...:....:.||.....|..|.
E. coli   177 -----FILTFGCEFPALG----------KHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFI 226

  Fly   367 QKLPQELQIALEEVRARGTSFSELTTIIETIAPS--VGNWIASLTTGRLSDVLIEQQILTRTQTR 429
            ..:|       |..:..|.|.::..|::.....|  ||.|..|... |..|:   |:|||     
E. coli   227 SWVP-------EYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFIL-RFFDL---QRILT----- 275

  Fly   430 RLMSWLVFLCGSMYMLQIKMSGARIWSVLGMGAYYASI 467
             :::.|..:.  ||:..........||:|.:|.:.::|
E. coli   276 -VLAGLAAIL--MYVFNTGTPAHMAWSILALGFFSSAI 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 134..522 CDD:475125 74/363 (20%)
tsgANP_417823.1 PRK03699 2..393 CDD:235151 74/363 (20%)

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