DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18788 and FEN2

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_009957.1 Gene:FEN2 / 850394 SGDID:S000000623 Length:512 Species:Saccharomyces cerevisiae


Alignment Length:431 Identity:86/431 - (19%)
Similarity:131/431 - (30%) Gaps:152/431 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 FYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYA------LVAVRLLVG 205
            |..||::..||...:......:..||.......:|||         |:|.      :.|:|....
Yeast    81 FMIGYIVGMVPNNLMLLCVPPRIWLSFCTFAWGLLTL---------GMYKVTSFKHICAIRFFQA 136

  Fly   206 ICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLLIAEQDWPVFFYLVG-GG 269
            :.|...|.....:|..|..|.|..:.::.....|.:|    .:.||.:    ...:|.:|.| .|
Yeast   137 LFESCTFSGTHFVLGSWYKEDELPIRSAIFTGSGLVG----SMFSGFM----QTSIFTHLNGRNG 193

  Fly   270 AVAWFLGFTLVCYSTPDHCPFIQSEEREYI-------RCNTSNSFLLTTGREREEMDGEDGYEGE 327
            ...|...|.:      |.|..:......:|       :.:..:.|.:|    |...:.::.:...
Yeast   194 LAGWRWLFII------DFCITLPIAIYGFIFFPGLPDQTSAVSKFSMT----RYIFNEQELHYAR 248

  Fly   328 DREHRREVEAT---CNTAP--------WRSML-------------NST-PLW------------- 354
            .|...|: |:|   .:|.|        |...|             ||| .||             
Yeast   249 RRLPARD-ESTRLDWSTIPRVLKRWHWWMFSLVWVLGGENLGFASNSTFALWLQNQKYTLAQRNN 312

  Fly   355 --------ALVSTSMQQEFQQKLPQELQIALEEVRARGTSFSELTTIIETIA----------PSV 401
                    .:|||.....:..|:|          |||....|...:::..|.          |.|
Yeast   313 YPSGIFAVGIVSTLCSAVYMSKIP----------RARHWHVSVFISLVMVIVAVLIRADPLNPKV 367

  Fly   402 GNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLC-----------GSMYMLQIKMSGA--R 453
                 ..:...|..|....|.:       ..||...:|           .||.|    .|||  .
Yeast   368 -----VFSAQYLGGVAYAGQAV-------FFSWANIICHADLQERAIVLASMNM----FSGAVNA 416

  Fly   454 IWSVLGMGAYYASIKLLPLDMSPN-----YAGTLMGISGGM 489
            .||:|    ::||      ||.|.     ||.....||.|:
Yeast   417 WWSIL----FFAS------DMVPKFERGCYALLATAISSGI 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 30/139 (22%)
MFS_1 135..498 CDD:284993 86/431 (20%)
FEN2NP_009957.1 MFS_FEN2_like 32..450 CDD:340885 86/431 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.