DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18788 and FEN2

DIOPT Version :10

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_009957.1 Gene:FEN2 / 850394 SGDID:S000000623 Length:512 Species:Saccharomyces cerevisiae


Alignment Length:431 Identity:86/431 - (19%)
Similarity:131/431 - (30%) Gaps:152/431 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 FYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYA------LVAVRLLVG 205
            |..||::..||...:......:..||.......:|||         |:|.      :.|:|....
Yeast    81 FMIGYIVGMVPNNLMLLCVPPRIWLSFCTFAWGLLTL---------GMYKVTSFKHICAIRFFQA 136

  Fly   206 ICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLLIAEQDWPVFFYLVG-GG 269
            :.|...|.....:|..|..|.|..:.::.....|.:|    .:.||.:    ...:|.:|.| .|
Yeast   137 LFESCTFSGTHFVLGSWYKEDELPIRSAIFTGSGLVG----SMFSGFM----QTSIFTHLNGRNG 193

  Fly   270 AVAWFLGFTLVCYSTPDHCPFIQSEEREYI-------RCNTSNSFLLTTGREREEMDGEDGYEGE 327
            ...|...|.:      |.|..:......:|       :.:..:.|.:|    |...:.::.:...
Yeast   194 LAGWRWLFII------DFCITLPIAIYGFIFFPGLPDQTSAVSKFSMT----RYIFNEQELHYAR 248

  Fly   328 DREHRREVEAT---CNTAP--------WRSML-------------NST-PLW------------- 354
            .|...|: |:|   .:|.|        |...|             ||| .||             
Yeast   249 RRLPARD-ESTRLDWSTIPRVLKRWHWWMFSLVWVLGGENLGFASNSTFALWLQNQKYTLAQRNN 312

  Fly   355 --------ALVSTSMQQEFQQKLPQELQIALEEVRARGTSFSELTTIIETIA----------PSV 401
                    .:|||.....:..|:|          |||....|...:::..|.          |.|
Yeast   313 YPSGIFAVGIVSTLCSAVYMSKIP----------RARHWHVSVFISLVMVIVAVLIRADPLNPKV 367

  Fly   402 GNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLC-----------GSMYMLQIKMSGA--R 453
                 ..:...|..|....|.:       ..||...:|           .||.|    .|||  .
Yeast   368 -----VFSAQYLGGVAYAGQAV-------FFSWANIICHADLQERAIVLASMNM----FSGAVNA 416

  Fly   454 IWSVLGMGAYYASIKLLPLDMSPN-----YAGTLMGISGGM 489
            .||:|    ::||      ||.|.     ||.....||.|:
Yeast   417 WWSIL----FFAS------DMVPKFERGCYALLATAISSGI 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 134..522 CDD:475125 86/431 (20%)
FEN2NP_009957.1 MFS_FEN2_like 32..450 CDD:340885 86/431 (20%)

Return to query results.
Submit another query.