DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and CG2003

DIOPT Version :10

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster


Alignment Length:444 Identity:110/444 - (24%)
Similarity:187/444 - (42%) Gaps:78/444 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 WPRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVA 199
            |..:.:|.::.::|.|..|:..|.|.|.:|:|.|.||....|.|::|:.||...|..||..|..|
  Fly    61 WSEEKKSYILSSYYWGCALAQFPAGYLCKRFGSKAVLFWGTLGSSLLSALTTYGVYAGGWKAYCA 125

  Fly   200 VRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLLIAEQ-DWPVFF 263
            :|||.|:|: ..:|.:...||.|.|..||..|.:...:|.:.|..:....:|::.:.. .||...
  Fly   126 IRLLQGLCQ-VTWPCIHQHLANWCPTAERTRLGAFAYTGFDCGNVLAMYGAGMIASSSLGWPGIS 189

  Fly   264 YLVGGGAVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGEDGYEGED 328
            |...|..:.|...:.|:..:......||...|:.||..:...|                     :
  Fly   190 YSAAGLGLIWCGLWLLLGANKASDARFIGEAEKAYIVGDIQRS---------------------E 233

  Fly   329 REHRREVEATCNTAPWRSMLNSTPLWALVS---------TSMQQEFQQKLPQELQIALEEVRARG 384
            |:..:::|     .||:.:..|.|::||:.         |:||.|    ||..|...|:......
  Fly   234 RKGPKKME-----IPWKGIFTSVPVYALLCARCADSWGLTTMQTE----LPTYLSGVLKLDMKSN 289

  Fly   385 TSFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLCGSMYMLQIKM 449
            ..||.|        |.:..|:.......::|||:.::.::.|..|:..:.:.....:..||.:.:
  Fly   290 AVFSAL--------PFLLMWVMCYVYLIIADVLLRKKWMSLTTLRKTYTSIALWAPASIMLSLVI 346

  Fly   450 SG------ARIWSVLGMGAYYASI---KLLPLDMSPNYAGTLMGISGGMGALPALLMP-YLEQLE 504
            .|      ..:...|.:|...|:.   :|..:|:|||:||.|.|:......|.|||.| .:..|.
  Fly   347 VGEGQKTLVLVLVTLSVGVSSAATIGSELNTIDLSPNHAGILAGLMSSFTNLMALLTPLVVGVLV 411

  Fly   505 TD------YKLVSSVRAAMW----VIGASYISGDVQAFN---------QPEREP 539
            ||      :::|.|:.|.:.    ||...:.:...|.:|         :||.:|
  Fly   412 TDPSQRSQWQIVFSLAAGVLFTGNVIFLIWGTAVTQPWNESKESRRELEPEEKP 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 134..522 CDD:475125 105/416 (25%)
CG2003NP_651903.2 MFS 21..442 CDD:475125 105/419 (25%)

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