DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18788 and Picot

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_725600.1 Gene:Picot / 36865 FlyBaseID:FBgn0024315 Length:529 Species:Drosophila melanogaster


Alignment Length:552 Identity:131/552 - (23%)
Similarity:231/552 - (41%) Gaps:122/552 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RWVLCCFTFLAIINAYTMRLCLDCTLNRIILECGGHRVDNVPQVLNPKALPNWRIELAMALNHTE 85
            |:.:....||.:.|||.||                               .|..:.:...:||| 
  Fly    40 RYFVTFMLFLGMANAYVMR-------------------------------TNMSVAIVAMVNHT- 72

  Fly    86 YQLRSRLKAGK-EQPDLNQISAKGTRDREPAGEKRPGQEDSQERLSCSEQWPRQTQSLVVMAFYA 149
                 .:|:|: |:.|            :..|::....:|||:.   ...|....|..::.:|:.
  Fly    73 -----AIKSGEAEEYD------------DECGDRDIPIDDSQDG---EFAWSSALQGYILSSFFY 117

  Fly   150 GYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRLLVGICEGPCFPA 214
            |||::.:|.|.||::||....|...:|.::|...|.|.|.|.||::.|.|||.:.|:.|||..|.
  Fly   118 GYVITQIPFGILAKKYGSLRFLGYGMLINSVFAFLVPVAARGGGVWGLCAVRFIQGLGEGPIVPC 182

  Fly   215 VCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLLIA---EQDWPVFFYLVGGGAVAWFLG 276
            ..|:||:|:|..||..:.:.|.:|.:.|..:...:||||..   :..||..||:.|.....|.:.
  Fly   183 THAMLAKWIPPNERSRMGAAVYAGAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIA 247

  Fly   277 FTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGEDGYEGEDREHRREVEATCNT 341
            |.:..:..|...|.|...|::||                     .|...|.|......:      
  Fly   248 FLIFVHEDPSSHPTIDEREKKYI---------------------NDSLWGTDVVKSPPI------ 285

  Fly   342 APWRSMLNSTPLWALVSTSMQQEF-QQKLPQELQIALEEVRARGTSFSELTTIIETIAPSVGNWI 405
             |:::::.|.|.:|::...|...: .:.|..||...:::|    ..||..:..:.:..|.:..|:
  Fly   286 -PFKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQV----LRFSLKSNGLLSSLPYLAMWL 345

  Fly   406 ASLTTGRLSDVLIEQQILTRTQTRRLMSWL------VFLCGSMY-------MLQIKMSGARIWSV 457
            .|:....::|.:|..:..:.|.||:|::.:      |.|..:.|       .|.|...|      
  Fly   346 FSMFISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIG------ 404

  Fly   458 LGM-GAYYASIKLLPLDMSPNYAGTLMGISGGMGALPALLMPYL---------EQLETDYKLVSS 512
            :|: |..|:..|:..||::|.:||.||.|:.....|..||.|..         :.:...:::|..
  Fly   405 VGLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQIVFF 469

  Fly   513 VRAAMWVIGASYI----SGDVQAFNQPEREPQ 540
            :.|.:::|..::.    ||:.|.::.||.:.|
  Fly   470 IAAFVYIICGTFYNIFGSGERQYWDNPEDDEQ 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 51/153 (33%)
MFS_1 135..498 CDD:284993 101/380 (27%)
PicotNP_725600.1 2A0114euk 41..501 CDD:129972 129/549 (23%)
MFS 100..485 CDD:119392 105/422 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 1 0.900 - - E1_KOG2532
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
76.960

Return to query results.
Submit another query.