DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18788 and SPAC1039.04

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_594995.1 Gene:SPAC1039.04 / 2542960 PomBaseID:SPAC1039.04 Length:507 Species:Schizosaccharomyces pombe


Alignment Length:411 Identity:92/411 - (22%)
Similarity:146/411 - (35%) Gaps:101/411 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 SLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRLLVG 205
            ::::..||..:||...|...|.:|:|...:|...:|:...::|........||   ::|||..:|
pombe    99 NIMISIFYIPFVLCAFPFSYLYKRFGAARILPFFMLSFGAMSLCQAAVKNFGG---MMAVRWFLG 160

  Fly   206 ICEGPCFPAVCALLAQWVPEQERG------MLASCVLS--GGEIGITMVQLVSGLLIAEQDWPVF 262
            :.|....|.|...|..:....|..      ..|:.|.|  ||.:...:..:..|.|   |.|...
pombe   161 MAESAVLPGVVYYLTTFYRRTELARRLAIFYAAANVSSAFGGLLAYGVFHIKGGKL---QGWQYL 222

  Fly   263 FYLVGGGAVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGEDGYEGE 327
            |.:.||......:...||...:.:...|:..||:             |..:.|.|.|..      
pombe   223 FLIEGGVTFLCAIVIFLVLPVSVETANFLTDEEK-------------TLAKMRIENDSS------ 268

  Fly   328 DREHRREVEATCNTAPWRSMLN--STP---LWALVSTSM---QQEFQQKLPQELQIALEEVRARG 384
                    .|......::..|.  ..|   ||.|...::   .......|||       .|.|.|
pombe   269 --------SAISEKLSFKQSLTVFKHPIAILWLLEEMALGVPLNSINNWLPQ-------IVAAMG 318

  Fly   385 TSFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQI-LTRTQTRRLMSWLVFLCGSMYMLQ-- 446
              ||.:.|.:.|:||::...|..|....:||.|..:.| |....:..::.::|:  ||:.::.  
pombe   319 --FSSVNTNLMTVAPAISGAIWLLVFAFISDFLKNRGIVLIAAISTTMIGFIVY--GSIDIMNHI 379

  Fly   447 --------IKMSGARIWSVLG---------------------------MGAYYASIKLLPLDMSP 476
                    :..:||...|||.                           ||...|:| ..|.| :|
pombe   380 GVSYFACFLMTAGAAASSVLTSTWYNNNTPNESRRAVFTSVGVPLANVMGLVSANI-FRPQD-AP 442

  Fly   477 NYAGTLMGISGGMGALPALLM 497
            .|...| ||:.|.|.|..||:
pombe   443 KYVPAL-GITAGFGGLGILLV 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 34/146 (23%)
MFS_1 135..498 CDD:284993 92/411 (22%)
SPAC1039.04NP_594995.1 MFS 71..471 CDD:119392 92/411 (22%)
2A0114 71..463 CDD:273326 92/411 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

Return to query results.
Submit another query.