DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and liz1

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001342731.1 Gene:liz1 / 2540342 PomBaseID:SPBC2G2.01c Length:514 Species:Schizosaccharomyces pombe


Alignment Length:437 Identity:82/437 - (18%)
Similarity:149/437 - (34%) Gaps:118/437 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 MAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRLLVGICEG 209
            :.|..||::..:||....:|...:...|...:...::|:.: .||.  .:.||:.:|..:.:.|.
pombe    74 VVFTCGYIIGQLPGSYALQRVPARLWFSVMNILWGLMTIFS-FAVH--SVRALMILRFFMAVAEA 135

  Fly   210 PCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLLIAEQDWPVFFYLVG-GGAVAW 273
            ..|.....:|..|..|.|....|....:.|.:|    .:.:|.|    ...|...|.| ||...|
pombe   136 STFAGTHYILGAWYKESELCKRAGIFSASGLVG----TMFAGYL----QTAVHSSLNGKGGLSGW 192

  Fly   274 --------FLGFTLVCYST---PD-----HCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGED 322
                    .|...|..|..   ||     ..|:...:|:|.       ||.....|.:::.....
pombe   193 RWLFIIDGILTIPLSLYGLFLFPDVPETTKAPYFTEQEKEL-------SFKRLPARPKKKPLTLK 250

  Fly   323 GYEGEDREHRREVEATCNTAPWRSMLNSTPLWALVSTSMQQEFQQKLPQELQIALEEVRARGTSF 387
            ..:...|.             || :.....|| :.|...|           .||:..:..:...:
pombe   251 AIKDIVRS-------------WR-IYGLCILW-IFSGETQ-----------AIAVNVLMGQWMKW 289

  Fly   388 SELTTIIE-----TIAPSVGNWIASLTTGRLSDVLIEQQ---------ILTRTQTRRLMSWLV-- 436
            |...::.:     |:..:|| .:::|....:||.|....         ::|......|::|.|  
pombe   290 SNKFSVAQINNYPTVITAVG-VVSTLGASVISDKLAGNPRWPFGLFLCVITTVSATILLAWNVPD 353

  Fly   437 -------FLCGSMYMLQ-IKMSGA----------------------RIWSVLGMGAYYASIKLLP 471
                   |..|..|..| :..|.|                      .||.:     ::|.| :.|
pombe   354 GAKFFAYFASGCTYAGQAVWFSWANDICRDNDQERGVVVFLMNMCQNIWHI-----WWAPI-MYP 412

  Fly   472 LDMSPNYAGTLMG--ISGGMGALPALLMPYLEQLETDYKLVSSVRAA 516
            ...:|.:...|:|  :.||:..:.:.::.|::  ..|.::..|::.|
pombe   413 NTDTPRFIKGLIGLLVVGGIVFVSSCIVSYMQ--IRDKRIKRSIQDA 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 31/143 (22%)
MFS_1 135..498 CDD:284993 78/417 (19%)
liz1NP_001342731.1 MFS_1 37..401 CDD:311564 68/371 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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