DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and SPCPB1C11.03

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001342988.1 Gene:SPCPB1C11.03 / 2539453 PomBaseID:SPCPB1C11.03 Length:570 Species:Schizosaccharomyces pombe


Alignment Length:371 Identity:84/371 - (22%)
Similarity:138/371 - (37%) Gaps:85/371 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 FYAGYVLSHVPGGRLAERYG-GKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRLLVGICEGP 210
            ||.||::...||..:.:.:. ||:| .....:.:|:..|...|...||   |:|:|..:|..|..
pombe   146 FYVGYIVGQFPGHYIMQTFPLGKFV-GLVTFSWSVIVFLHCCAYNYGG---LIALRFFLGFTESC 206

  Fly   211 CFPAVCALLAQWVPEQERGML-----ASCVLSGGEIGITMVQLVSGLLIAEQD---WPVFFYLVG 267
            ..||:.|.:..:...||:..|     .||:..|...|.    :..||....:.   |.:|..:.|
pombe   207 LLPAMEATMGMFFTHQEQAFLQPVFWISCLSCGIPAGF----IAYGLEFVTKSIAPWKLFMIITG 267

  Fly   268 GGAVAWFLGFTLVCY--STPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGEDGYEGEDRE 330
            |  :.:||...|..|  ..|....|:..||:.|           |..|.|:...|  |.|.:..:
pombe   268 G--ITFFLSIFLFFYYPDNPSKARFLTDEEKLY-----------TIDRVRKSTRG--GIENKIFK 317

  Fly   331 HRREVEATCNTAPWRSMLNSTPLWALVSTSMQQEFQQKL------PQELQIALEEVRARGTSFSE 389
            ..:.:||..:...|  :........::|.::  .:||.|      ..:|...|..|...|  ::.
pombe   318 KHQFIEALKDPITW--LFTFAAFTLMLSNNL--AYQQNLIFTSLNVSDLNSTLVGVALAG--YNT 376

  Fly   390 LTTIIETIA-----------------PSVGNWIA------SLTTGRLSDVLIEQQI--------- 422
            ::.||.|.|                 ||:...||      |...|.|:.::|....         
pombe   377 VSAIIATFAMYLIPNQSAYHAMFWMLPSITGGIAFVALPWSNRIGELATMIIASDFGITYIIALG 441

  Fly   423 -LTRTQ---TRRLMSWLVFLCGSMYMLQIKMSGARIWSVLGMGAYY 464
             .|.|.   |::|...|:|:.|  |.: ..:...::|.......||
pombe   442 WTTATSTGYTKKLTRGLMFMVG--YAI-ANIISPQLWQSRDAPRYY 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 37/141 (26%)
MFS_1 135..498 CDD:284993 84/371 (23%)
SPCPB1C11.03NP_001342988.1 UhpC 102..494 CDD:332119 84/371 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto101056
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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