DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and Y19D10A.8

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001303767.1 Gene:Y19D10A.8 / 189486 WormBaseID:WBGene00021223 Length:458 Species:Caenorhabditis elegans


Alignment Length:581 Identity:109/581 - (18%)
Similarity:187/581 - (32%) Gaps:223/581 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PAVEQKLSDIF-----IYLEVRQRWVLCCFTFLAIINAYTMRLCLDCTLNRIILECGGHRVDNVP 62
            |.|.:..|.:|     ||:.|   ..|.|.||:. :|..|:...:.|             :|::.
 Worm     8 PQVRKTSSFVFWNRTRIYVMV---LTLICLTFMQ-MNTLTLNFTVIC-------------MDDIV 55

  Fly    63 QVLNPKALPNWRIELAMALNHTEYQL------RSRLKAGKE-------QPDLNQISAKGTRDREP 114
            :            :..|..|.||...      :|.|.:|..       .|.:.|||:.|.|:   
 Worm    56 E------------DFHMFHNSTETHWFERSTEKSLLFSGVAIGGLIGLVPSVPQISSIGLRN--- 105

  Fly   115 AGEKRPGQEDSQERLSCSEQWPRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSA 179
                                    ||::      :|::                         |.
 Worm   106 ------------------------TQTI------SGFI-------------------------SG 115

  Fly   180 VLTLLTPTAVRQGGLYALVAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGIT 244
            :.:.|.|.|| ..|.|.....|:|.||.....|.||..:...|.|:.|.....|.:....::...
 Worm   116 LGSFLFPLAV-SVGFYTSFLCRVLQGIGAAVLFTAVGVVPGVWAPKSEANTFMSILACAFQLSNV 179

  Fly   245 MVQLVSGLLI-AEQDWPVFFYLVGGGAVAWFLGFTLVCYSTPD----HCPFIQSEEREYIRCNTS 304
            :...|||||. :...|...:|:  .||:.:.| :|:..::..|    |....|.|.|:       
 Worm   180 ICMPVSGLLCESAVGWRSIYYI--SGAITFVL-YTVFWFTYTDDPKLHRNVSQKELRK------- 234

  Fly   305 NSFLLTTGREREEMDGEDGYEGEDREHRREVEATCNTAPWRSMLNSTPLWALVS-TSMQQEFQQK 368
                ::||:                     ||......|:.::  ||....::| .|:   |...
 Worm   235 ----ISTGK---------------------VEKIKEPVPYFAV--STDPTVIISWISL---FGGN 269

  Fly   369 L---------PQELQIALEEVRARGTSFSELTTIIETIAPSVGNWIASLTTGRLSDV-------- 416
            :         |..|:..|:        |....|...|..|.:.:.||..:.||:||.        
 Worm   270 MGFYVLCIYGPTYLREVLK--------FDVKETGFLTALPFILSAIAKFSAGRISDKLTGLSERA 326

  Fly   417 ------------LIEQQILTRTQTRRLMSWLVF----------LCGSMYMLQIKMSGARIWSVLG 459
                        |:...::....|.|:::.:.|          :.|.:..:|::......:::..
 Worm   327 RFVFFASIFQIGLVAGLVVMAFTTNRVIAQIAFNFAIVSSGLNIMGVVKCVQLRCLQHVHYTLTV 391

  Fly   460 MG-AYYASIKLLPLDMS---PNYAGTLMGISGGMGALPALLMPYLEQLETDYKLVSSVRAA 516
            |. ..|||..|.|..:|   |||..                    ||.:|.:.::|.:..|
 Worm   392 MSFTAYASQFLSPTLVSIICPNYTN--------------------EQWKTFFLVISGLIVA 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 32/151 (21%)
MFS_1 135..498 CDD:284993 76/411 (18%)
Y19D10A.8NP_001303767.1 MFS 40..441 CDD:391944 98/545 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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