DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and slc-17.4

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_503071.2 Gene:slc-17.4 / 189054 WormBaseID:WBGene00012130 Length:573 Species:Caenorhabditis elegans


Alignment Length:562 Identity:113/562 - (20%)
Similarity:200/562 - (35%) Gaps:159/562 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CCFTFLAIINAYTMRLCLDCTLNRIILECGGHRVDNVPQVLNPKALPNWRIELAMALNHTEYQLR 89
            ||.||:.:..|.:|    .|.:|                            ..|:||....:   
 Worm    42 CCTTFMRMHIAISM----TCMIN----------------------------STALALESAVF--- 71

  Fly    90 SRLKAGKEQPDLNQISAKGTRDREPAGEKRPGQEDSQERLSCSEQ----------------WPRQ 138
                     |:..:.|:....:.||....           :||..                |..|
 Worm    72 ---------PEAFENSSSIFEELEPVSNG-----------ACSSNADVNKKVVVDYGGQLVWNSQ 116

  Fly   139 TQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRLL 203
            .|:|:....:.|.:::.:|......||..::||.||:....::|.:||....:.|.|.:...|::
 Worm   117 EQNLIFSGTFWGSIITVLPSMFFINRYSPRYVLQAAVGCYILMTAITPYIATRFGPYPVFISRVI 181

  Fly   204 VGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEI-GITMVQLVSGLLIAEQDWPVFFYLVG 267
            :|:.||...||..|:||.|.|..||....|...:|.:: |.....:.:.|..:...||..||...
 Worm   182 MGLGEGFILPANNAILANWFPSAERSTAISLFTTGNQMAGAGGNPVAASLCASSFGWPSIFYFAS 246

  Fly   268 GGAVAWFLGFTLVCYSTPDHCPFIQSEEREYI------RCNTSNSFLLTTGREREEMDGEDGYEG 326
            ..:..|.:.:.|...:.|..|..:...||:|:      |.|.:|..|:                 
 Worm   247 IVSTIWSVCWFLTASNQPSKCKVMTKTERDYLDANVVRRSNKTNRSLV----------------- 294

  Fly   327 EDREHRREVEATCNTAPWRSMLNSTPLWALVSTSMQQEF-----QQKLPQELQIALE-EVRARGT 385
                           .|:..:|.|....|.:.......|     |..||...:..|. .|.|.||
 Worm   295 ---------------VPYSKILKSPAFLAQLLCQFVINFIVTLLQIYLPNYFKDVLHLGVIANGT 344

  Fly   386 SFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLCGSMYMLQIK-- 448
                     .|..|::.|:...:..|...|...|::|::.|...:|...:....|:::::.|.  
 Worm   345 ---------YTSVPNIVNFALKIVWGITIDRAKEKKIISGTFGVKLSQSIANFGGALFLILITYF 400

  Fly   449 ----------MSGARIWSVLG--MGAYYASIKLLPLDMSPNYAGTLMGIS---GGMG--ALPALL 496
                      :....::..:|  :..:|.|:    |.::|.|..|:..||   ..||  |.||::
 Worm   401 VDCTNPTLGFVFFCMMYGCMGTLVSGFYTSL----LSLAPKYTATMSSISVFCAMMGRLATPAIV 461

  Fly   497 -----MPYLEQLETDYKLVSSVRAAMWVIGASYI---SGDVQ 530
                 ...|.:.:|.:.:.:   ||..:.||.::   ||::|
 Worm   462 GLIKKQNTLSEWQTLFLVCA---AANIICGAVFLVFGSGELQ 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 41/167 (25%)
MFS_1 135..498 CDD:284993 87/399 (22%)
slc-17.4NP_503071.2 MFS 34..495 CDD:391944 110/555 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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