DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and F56A4.12

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001303741.1 Gene:F56A4.12 / 186355 WormBaseID:WBGene00018920 Length:465 Species:Caenorhabditis elegans


Alignment Length:148 Identity:41/148 - (27%)
Similarity:59/148 - (39%) Gaps:14/148 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 RQTQ-SLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAV 200
            |.|: ||:......|.::..:|...|....|...|.:.:.:.||....|.|.|| ..|.|..:..
 Worm    78 RNTEKSLLFSGAAIGGLIGLIPAVPLISSLGLGNVQTISGIISAFGAFLFPLAV-SIGFYTSLLC 141

  Fly   201 RLLVGICEGPCFPAVCALLAQWVPEQERG---MLASCVLSGGEIGITMVQLVSGLLI-AEQDWPV 261
            |:|.|:.....|..|..:...|.|..|..   .:.||.|   ::...:...|||||. :...|..
 Worm   142 RILQGVGSAIMFTTVGVVPGVWAPSNEANTFMAILSCAL---QLSNIICMPVSGLLCESALGWRS 203

  Fly   262 FFYLVGG-----GAVAWF 274
            .:||.||     ..|.||
 Worm   204 IYYLFGGLTFIIYIVFWF 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 41/148 (28%)
MFS_1 135..498 CDD:284993 41/148 (28%)
F56A4.12NP_001303741.1 MFS 81..443 CDD:391944 39/145 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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