DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and D1046.4

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_501553.2 Gene:D1046.4 / 183909 WormBaseID:WBGene00008365 Length:568 Species:Caenorhabditis elegans


Alignment Length:133 Identity:32/133 - (24%)
Similarity:52/133 - (39%) Gaps:16/133 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 QSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRLLV 204
            ||::.|....|.:|:..|...|..::|.:.:.|...|.|..||...|.::..|..| :...:.|:
 Worm   103 QSIMFMMSPLGSLLAMYPTWMLIMKFGYRRICSTTCLISTFLTAFLPWSIFFGFPY-VATCQFLL 166

  Fly   205 GICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLL--IAEQ------DWPV 261
            |.........|.:::.:|...:....   |.|    :..|..|:....|  ||..      .|||
 Worm   167 GATAPSALLLVPSVIRKWSTRKNDHF---CFL----VLFTFQQISPAALYPIAAYISKTFVGWPV 224

  Fly   262 FFY 264
            .||
 Worm   225 IFY 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 32/133 (24%)
MFS_1 135..498 CDD:284993 32/133 (24%)
D1046.4NP_501553.2 MFS 96..469 CDD:119392 32/133 (24%)
2A0114 96..467 CDD:273326 32/133 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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