DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and C18D1.2

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_496174.2 Gene:C18D1.2 / 182781 WormBaseID:WBGene00007669 Length:478 Species:Caenorhabditis elegans


Alignment Length:392 Identity:80/392 - (20%)
Similarity:139/392 - (35%) Gaps:78/392 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 SLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRLLVG 205
            :|:..|...|.:.:..|...:.::.|.:.|::...|.||..|.:.|.|... |.|.|:|:|.|.|
 Worm    82 NLLFSAVAIGAMCAVYPFMYIIQKKGSRSVVTFVGLFSAATTAMIPWAAYL-GFYPLLAMRFLQG 145

  Fly   206 ICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIG-ITMVQLVSGLLIAEQDWPVFFYLVGGG 269
            |.....|..:..:..||..:.:.....:|:....:|| |..:.:.|....:...||..:|.....
 Worm   146 IGLSTGFTLIGIVTRQWSMQVQGAFFFACLSCFFQIGPIFTMPVASAFCTSSFGWPAVYYTHSIV 210

  Fly   270 AVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGEDGYEGEDREHR-- 332
            .:..||.|..:...:|.....:...|...|:..                      :||.:..|  
 Worm   211 TIFIFLLFFTLYRESPVFHTIVTELELSKIQRG----------------------KGETKRQRVP 253

  Fly   333 -----RE-------VEATCNTAPWRSMLNSTP--LWALVSTSMQQEFQ-QKLPQELQIALEEVRA 382
                 |:       ..|..|....:..:..||  |..::..|:|.... ..|||.: .|..:|.|
 Worm   254 LVQILRDPVVLSIWTTALANFMGIQLTMQFTPTYLHKILGFSVQDTGPFSALPQVI-TAFVKVSA 317

  Fly   383 RGTSFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLCGSMYMLQI 447
             |.|..:|.......:..:.|   ||..|.:|.:.:...|:..:.....:..|:..|        
 Worm   318 -GYSADKLQCCTPKTSVRIFN---SLALGGMSFMFVGLAIIPTSMPYLGLFMLILSC-------- 370

  Fly   448 KMSGARIWSVLGM--GAYYASIKLLPLDMSPNYAGT----LMGISGGMGALPALLMPYLEQL--E 504
                    |::|.  |.::.        .|..||..    :||::..:..|.|||.|.:..:  |
 Worm   371 --------SIIGFNCGGFFR--------CSAIYAAQHNHFVMGMNSFLNCLAALLAPVIVNIFVE 419

  Fly   505 TD 506
            .|
 Worm   420 ND 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 34/139 (24%)
MFS_1 135..498 CDD:284993 77/380 (20%)
C18D1.2NP_496174.2 MFS 36..448 CDD:391944 80/392 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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