DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and C18D1.2

DIOPT Version :10

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_496174.2 Gene:C18D1.2 / 182781 WormBaseID:WBGene00007669 Length:478 Species:Caenorhabditis elegans


Alignment Length:392 Identity:80/392 - (20%)
Similarity:139/392 - (35%) Gaps:78/392 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 SLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRLLVG 205
            :|:..|...|.:.:..|...:.::.|.:.|::...|.||..|.:.|.|... |.|.|:|:|.|.|
 Worm    82 NLLFSAVAIGAMCAVYPFMYIIQKKGSRSVVTFVGLFSAATTAMIPWAAYL-GFYPLLAMRFLQG 145

  Fly   206 ICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIG-ITMVQLVSGLLIAEQDWPVFFYLVGGG 269
            |.....|..:..:..||..:.:.....:|:....:|| |..:.:.|....:...||..:|.....
 Worm   146 IGLSTGFTLIGIVTRQWSMQVQGAFFFACLSCFFQIGPIFTMPVASAFCTSSFGWPAVYYTHSIV 210

  Fly   270 AVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGEDGYEGEDREHR-- 332
            .:..||.|..:...:|.....:...|...|:..                      :||.:..|  
 Worm   211 TIFIFLLFFTLYRESPVFHTIVTELELSKIQRG----------------------KGETKRQRVP 253

  Fly   333 -----RE-------VEATCNTAPWRSMLNSTP--LWALVSTSMQQEFQ-QKLPQELQIALEEVRA 382
                 |:       ..|..|....:..:..||  |..::..|:|.... ..|||.: .|..:|.|
 Worm   254 LVQILRDPVVLSIWTTALANFMGIQLTMQFTPTYLHKILGFSVQDTGPFSALPQVI-TAFVKVSA 317

  Fly   383 RGTSFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLCGSMYMLQI 447
             |.|..:|.......:..:.|   ||..|.:|.:.:...|:..:.....:..|:..|        
 Worm   318 -GYSADKLQCCTPKTSVRIFN---SLALGGMSFMFVGLAIIPTSMPYLGLFMLILSC-------- 370

  Fly   448 KMSGARIWSVLGM--GAYYASIKLLPLDMSPNYAGT----LMGISGGMGALPALLMPYLEQL--E 504
                    |::|.  |.::.        .|..||..    :||::..:..|.|||.|.:..:  |
 Worm   371 --------SIIGFNCGGFFR--------CSAIYAAQHNHFVMGMNSFLNCLAALLAPVIVNIFVE 419

  Fly   505 TD 506
            .|
 Worm   420 ND 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 134..522 CDD:475125 80/392 (20%)
C18D1.2NP_496174.2 MFS 36..448 CDD:475125 80/392 (20%)

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