DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and C01B4.8

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_503682.1 Gene:C01B4.8 / 182055 WormBaseID:WBGene00015272 Length:478 Species:Caenorhabditis elegans


Alignment Length:387 Identity:85/387 - (21%)
Similarity:137/387 - (35%) Gaps:121/387 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 PRQT--------QSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQG 192
            |.:|        :|||..:...|.:|..:....|..|.|.:.|||...:.|.:.|:|.|.|| :.
 Worm    74 PNETHWFEDSNMKSLVFSSMAVGGLLGLLIAMPLMHRVGVRLVLSICGVFSILGTILFPLAV-EW 137

  Fly   193 GLYALVAVRLLVGICEGPCFPAVCALLAQWVPEQERG---MLASCVLSGGEIGITMVQLVSGLLI 254
            ..::::.||.|.|:.....|..:.::...|.|..|.|   .:.||......:   :...:||.|.
 Worm   138 NFFSVLVVRFLQGLGISMVFTVLGSVPTAWAPNNESGTFLAVLSCAFQWSNV---ICMPISGFLC 199

  Fly   255 -AEQDWPVFFYLVGGGAVAWFLGFTLVCYSTP-DHCPFIQSEEREYIRCNTSN---SFLLTTGRE 314
             :...|...:||.|...:.:||.|......:| ||             .|.||   |.:|     
 Worm   200 ESSWGWRSIYYLFGIVTIVFFLAFYFFYTDSPTDH-------------RNVSNKELSLIL----- 246

  Fly   315 REEMDGEDGYEGEDR--EHRREV------EATCNTAPWRSML-NSTPLWALVSTSMQQEFQQKLP 370
                        :|:  .|:..|      :..|....|.|.: .:.....||...         |
 Worm   247 ------------QDKTVTHKEPVPYLAICKDPCVLVTWMSNIGGNLGFLTLVLYG---------P 290

  Fly   371 QELQIALEEVRARGTSFSE-----LTTIIETIAPSVGNWIASLTTGRLSD--VLIEQQ------- 421
            ..|:..| ....|||.|:.     |:..:::||            |:|||  ..:.::       
 Worm   291 TYLREVL-NFEVRGTGFASALPFLLSAAVKSIA------------GQLSDRCDFVSERVRFTICG 342

  Fly   422 ILTR-----------TQTRRLMSWLVFLCGSMYMLQIKMSGARIWSVLGMGAYYASIKLLPL 472
            |:.|           |.:.||::.:.|      ...|.:||..|     ||    ::|.|.|
 Worm   343 IVARLGLAIGYIGMATTSSRLVAQIAF------TFSIAVSGLNI-----MG----TVKCLQL 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 40/155 (26%)
MFS_1 135..498 CDD:284993 85/387 (22%)
C01B4.8NP_503682.1 MFS 56..443 CDD:391944 85/387 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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