DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18788 and Y15E3A.4

DIOPT Version :10

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_510539.1 Gene:Y15E3A.4 / 181623 WormBaseID:WBGene00012443 Length:469 Species:Caenorhabditis elegans


Alignment Length:511 Identity:97/511 - (18%)
Similarity:167/511 - (32%) Gaps:149/511 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VEQKLSDIFIYLEVRQRWVL-----CCFTFLA----IINAYTMRLCLDCTLNRIILECGGHRVDN 60
            :::|.|.:..:|..|||:::     .|...:|    :|| :|| :|:...:|...| ......||
 Worm     1 MKEKGSTLVPFLADRQRYIILAIGTLCIAAIASNMTVIN-FTM-ICMAKPVNSSAL-TSNVEADN 62

  Fly    61 VPQVLNPKALPNWRIELAMALNHTEYQLRSRLKAGKEQPDLNQISAKGTRDREPAGEKRPGQEDS 125
            :......|::..|                              .:|.||                
 Worm    63 LAYSNKQKSIIMW------------------------------AAAVGT---------------- 81

  Fly   126 QERLSCSEQWPRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVR 190
                 .:..||          |:..|.           ::|.:.|..||.:.|.:.|.:.|.|. 
 Worm    82 -----LAAAWP----------FHWFYT-----------QFGARSVFFAAGVVSTLSTAVMPLAA- 119

  Fly   191 QGGLYALVAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSG-LLI 254
            :.....||..|...|:..|..|.|:..::..|...::.|:..|.:.|..:|.:.....|:| |..
 Worm   120 EVHFNFLVVARFFQGVSFGADFAAIGLIVVNWASLKQHGLFISLLSSFSQISVMFTMPVAGELCE 184

  Fly   255 AEQDWPVFFY----LVGGGAVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGRER 315
            :...|...:|    |.|....||...:.    ..|...|.:...|.|.|...             
 Worm   185 STWGWQSVYYVHAVLSGVLFTAWLYFYR----DNPTKHPQMTEIELEKIHRG------------- 232

  Fly   316 EEMDGEDGYEGEDREHRREVEATCNT-----APWRS------------MLNSTPLWALVSTSMQQ 363
                     :|:.:||.:...|...|     |.|.|            |...|.|..::..::..
 Worm   233 ---------KGDVKEHEKAPIAKILTNSVMLAVWLSAFGELMMSQFIVMYGPTFLKEVLGFAVNH 288

  Fly   364 E-FQQKLPQELQIALEEVRARGTSFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQ 427
            . :...:|:.|.:|.:.:  .|.:...:....|.....:.|.||.:.:|....:|   ..|.:.|
 Worm   289 TGYFVAVPRALHLAFKII--SGVASDRIQFWSEKTKMRIFNTIALMVSGAFFCIL---GYLPKEQ 348

  Fly   428 TR-RLMSWLV------FLCGSMYMLQIKMSGARIWSVLGMGAYYASIKLLPLDMSP 476
            .. .|::.||      |:||..|.....::......||....:   ||.|.|.:.|
 Worm   349 AHLSLVALLVIECSTGFICGGFYKCATLVARQHSHFVLSQIQF---IKCLSLFIEP 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 134..522 CDD:475125 75/373 (20%)
Y15E3A.4NP_510539.1 MFS 18..438 CDD:475125 91/494 (18%)

Return to query results.
Submit another query.