DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18788 and Y15E3A.4

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_510539.1 Gene:Y15E3A.4 / 181623 WormBaseID:WBGene00012443 Length:469 Species:Caenorhabditis elegans


Alignment Length:511 Identity:97/511 - (18%)
Similarity:167/511 - (32%) Gaps:149/511 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VEQKLSDIFIYLEVRQRWVL-----CCFTFLA----IINAYTMRLCLDCTLNRIILECGGHRVDN 60
            :::|.|.:..:|..|||:::     .|...:|    :|| :|| :|:...:|...| ......||
 Worm     1 MKEKGSTLVPFLADRQRYIILAIGTLCIAAIASNMTVIN-FTM-ICMAKPVNSSAL-TSNVEADN 62

  Fly    61 VPQVLNPKALPNWRIELAMALNHTEYQLRSRLKAGKEQPDLNQISAKGTRDREPAGEKRPGQEDS 125
            :......|::..|                              .:|.||                
 Worm    63 LAYSNKQKSIIMW------------------------------AAAVGT---------------- 81

  Fly   126 QERLSCSEQWPRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVR 190
                 .:..||          |:..|.           ::|.:.|..||.:.|.:.|.:.|.|. 
 Worm    82 -----LAAAWP----------FHWFYT-----------QFGARSVFFAAGVVSTLSTAVMPLAA- 119

  Fly   191 QGGLYALVAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSG-LLI 254
            :.....||..|...|:..|..|.|:..::..|...::.|:..|.:.|..:|.:.....|:| |..
 Worm   120 EVHFNFLVVARFFQGVSFGADFAAIGLIVVNWASLKQHGLFISLLSSFSQISVMFTMPVAGELCE 184

  Fly   255 AEQDWPVFFY----LVGGGAVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGRER 315
            :...|...:|    |.|....||...:.    ..|...|.:...|.|.|...             
 Worm   185 STWGWQSVYYVHAVLSGVLFTAWLYFYR----DNPTKHPQMTEIELEKIHRG------------- 232

  Fly   316 EEMDGEDGYEGEDREHRREVEATCNT-----APWRS------------MLNSTPLWALVSTSMQQ 363
                     :|:.:||.:...|...|     |.|.|            |...|.|..::..::..
 Worm   233 ---------KGDVKEHEKAPIAKILTNSVMLAVWLSAFGELMMSQFIVMYGPTFLKEVLGFAVNH 288

  Fly   364 E-FQQKLPQELQIALEEVRARGTSFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQ 427
            . :...:|:.|.:|.:.:  .|.:...:....|.....:.|.||.:.:|....:|   ..|.:.|
 Worm   289 TGYFVAVPRALHLAFKII--SGVASDRIQFWSEKTKMRIFNTIALMVSGAFFCIL---GYLPKEQ 348

  Fly   428 TR-RLMSWLV------FLCGSMYMLQIKMSGARIWSVLGMGAYYASIKLLPLDMSP 476
            .. .|::.||      |:||..|.....::......||....:   ||.|.|.:.|
 Worm   349 AHLSLVALLVIECSTGFICGGFYKCATLVARQHSHFVLSQIQF---IKCLSLFIEP 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 33/155 (21%)
MFS_1 135..498 CDD:284993 75/372 (20%)
Y15E3A.4NP_510539.1 MFS 18..438 CDD:391944 91/494 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.