DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18788 and slc-17.9

DIOPT Version :10

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001379067.1 Gene:slc-17.9 / 181189 WormBaseID:WBGene00011643 Length:516 Species:Caenorhabditis elegans


Alignment Length:449 Identity:95/449 - (21%)
Similarity:172/449 - (38%) Gaps:102/449 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 IELAMALNHTEYQLRSRLKAGKEQPDLNQISAKGTRDREPAGEKRPGQEDSQERLSCSE----QW 135
            :.||:..::....:...:|    :||.|...              |..|...|.:.|:.    .|
 Worm    33 VALAIGTSNISQSMVCMVK----KPDTNYTC--------------PLAEPEVEAIPCNHPKQFAW 79

  Fly   136 PRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAA----ILTSAVLTLLTPTAVRQGGLYA 196
            ....|.|:......|.:...:.|.: |:|..|||.:.||    |:::|||      .:..|..:|
 Worm    80 SSIQQGLIYSGQNFGSLFMVITGWQ-ADRLNGKWTIVAAMAFIIVSNAVL------PISAGASFA 137

  Fly   197 LV-AVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLLIAEQ--- 257
            || .:|:|.|..:....||..:|:.:|.|.:||......|.||.:||..::..:.|.|....   
 Worm   138 LVFFLRVLTGFGDALLSPASSSLITRWFPPKERPSALGIVTSGRQIGTLIILPIGGWLCGSDGSK 202

  Fly   258 ---DWPVFFYLVGGGAVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMD 319
               .||..|||....|.|..:.:.:.....|.....|...|..||            .|:.||  
 Worm   203 FLGGWPAIFYLSSVVAAAVLVIWVVFSADKPSKHLCISHNEEAYI------------NRKIEE-- 253

  Fly   320 GEDGYEGEDREHRREVEATCNTAPWRSMLNSTPLWALVSTSMQQEFQ-----QKLPQELQIALEE 379
                 |...:.:.|:     || ||:::..|..:|..|:..:..||.     |.||:        
 Worm   254 -----ENIGKRNNRK-----NT-PWKAIFTSKQVWVAVAALVCHEFPLVIMLQFLPK-------- 299

  Fly   380 VRARGTSFSELTTIIETI------APSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFL 438
                  .||::..:..|:      .|....:::...:..|:..|.....|.:||:.::.:::..|
 Worm   300 ------FFSDVLGLSNTVNGLVSALPMAILFLSKCLSASLASYLTANGYLRKTQSCKIFNFIASL 358

  Fly   439 ----CGSMYMLQIKMSGARIWSVLGM-------GAYYASIKLLPLDMSPNYAGTLMGIS 486
                |.:...|...:..| ||:::.:       |.:...:....:.::|.::|.:.|::
 Worm   359 GLGICIAATPLMSNLQHA-IWAIIILCLANAFAGLHTPGVLTAIVQLAPAFSGIITGLA 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 134..522 CDD:475125 85/386 (22%)
slc-17.9NP_001379067.1 2A0114euk 5..474 CDD:129972 95/449 (21%)

Return to query results.
Submit another query.