DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and R10D12.1

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_506456.1 Gene:R10D12.1 / 179888 WormBaseID:WBGene00011185 Length:485 Species:Caenorhabditis elegans


Alignment Length:379 Identity:71/379 - (18%)
Similarity:133/379 - (35%) Gaps:101/379 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 WPRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVA 199
            :.||.:::::.....|.|....|......:.|.|.|...:.:.:|:.|.|.| .:.....:..:.
 Worm    83 YTRQEKTVLLSTVAIGAVCGVFPVIIGISKLGLKKVFMTSGVLTAISTFLIP-ILAPLHFHLFIM 146

  Fly   200 VRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSG-LLIAEQDWPVFF 263
            :|.:.|:....|||||.|:.:.|....::|:..:.:.:.|:........|:| |..:...|...|
 Worm   147 LRFVQGLSYAACFPAVGAITSSWASLAQQGLFIAALTTFGQTSSIFSMPVAGELCTSVFGWKSVF 211

  Fly   264 YLVGGGAV-------AWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGE 321
            ||   .|:       .||..||    .:|:....::..|...|....|                 
 Worm   212 YL---HAIISLVVFTIWFALFT----DSPEDNKLVRPAELAEIEFGKS----------------- 252

  Fly   322 DGYEGEDREHRREVEATCNTAPWRSMLNSTPLWA--------LVSTSMQQEFQQKLPQELQIALE 378
               |.|..||        :..|:..:|.:..:|.        |::..:...:.       .:.|.
 Worm   253 ---EDEIHEH--------SNTPYLEILTTPSVWGIWIGAFGDLIAVQLIHIYS-------PVFLH 299

  Fly   379 EVRARGTSFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLCGSMY 443
            :|  .|.||.:  |......|.:..:...:..|..||     ::...::|.:|            
 Worm   300 DV--GGYSFEK--TGFAAAVPVLFQFFVKMFAGHSSD-----KVHGISETTKL------------ 343

  Fly   444 MLQIKMSGARIWSVLGMGAYYASIKLLPLDMSPNYAGTLMGISGGMGALPALLM 497
                     ||::.:.:||  ::|.|:.|..          :..|.|.|..:||
 Worm   344 ---------RIYNTIALGA--SAIFLVSLGF----------VKQGQGVLGLVLM 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 35/152 (23%)
MFS_1 135..498 CDD:284993 71/379 (19%)
R10D12.1NP_506456.1 MFS 55..455 CDD:391944 71/379 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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