DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18788 and slc-17.7

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_505399.1 Gene:slc-17.7 / 179308 WormBaseID:WBGene00022788 Length:506 Species:Caenorhabditis elegans


Alignment Length:563 Identity:111/563 - (19%)
Similarity:196/563 - (34%) Gaps:163/563 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DIFIYLEVRQRWVLCCFTFLAI--INAYTMRLCLDCTLNRIILECGGHRVDNVPQVLNPKALPNW 73
            |::....||.|.|:.....|.|  :....:.:.:.|.||...|      .|..|.:    |..|.
 Worm     6 DLWSLRSVRLRVVIAIALALTIEGLMRSNLNMAIVCMLNSTAL------TDGKPMI----ASLNT 60

  Fly    74 RIELAMALNHTEYQLRSRLKAGKEQPDLNQISAKGTRDREPAGEKRPGQEDSQERLSCSEQWPRQ 138
            .||.|.       .|...|:.|:.:    .:..|||                       ..|..|
 Worm    61 SIEPAT-------PLCPLLQFGESK----VVEHKGT-----------------------IFWTSQ 91

  Fly   139 TQSLVVMAFYAG--------YVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQG--G 193
            .::::..|||||        .||:...|...:..|||        :.:.|.|.|||....|.  |
 Worm    92 DRAIIFAAFYAGGLVATLASEVLNRYIGATRSVLYGG--------IANVVGTFLTPFVASQTNFG 148

  Fly   194 LYALVAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSG-LLIAEQ 257
            .:.::.:|.::|..:|..:|.:..|:|||.|..|:....:...:|.::.:.:....:. |.....
 Worm   149 TFPIILLRFVMGFGQGVLWPCMLVLIAQWFPVNEKSTALAIATTGNQLSVVIAMFATAELCQLPW 213

  Fly   258 DWPVFF--YLVGG--GAVAWFLGFTLVCYSTPDHC-PFIQSEEREYIRCNTSNSFLLTTGREREE 317
            .||:.|  |.|.|  ..:.|:    ::.|.:|.|. ..:..:|..||          ||.|.|..
 Worm   214 GWPMAFHVYAVCGIVMCIIWY----MMVYDSPCHADKKLSRDELHYI----------TTERVRLR 264

  Fly   318 MDGEDGYEGEDREHRREVEATCNTAPWRSMLNSTPLWALVSTSMQQEFQQKLPQELQIALEEVRA 382
                       .:|..          |.:::.|..:||:.::|....:              |..
 Worm   265 -----------PQHPN----------WMALMKSPVVWAIAASSFAHNY--------------VTV 294

  Fly   383 RGTSFSEL--TTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTR------TQTRRLMSWL---- 435
            ...::..|  .|::.....|.|.|.|      |..||   |::::      .::.|...|.    
 Worm   295 GTITYLPLYYKTVLNMSLTSNGLWSA------LPFVL---QLISKVFYAGMAESARKRDWSDINR 350

  Fly   436 ------------VFLC-GSMYMLQIKMSGARIWSV-LGM---GAYYASIKLLPLDMSPNYAGTLM 483
                        :.:| |.:.:......||.|:.: |.|   ..|........:.::|.....:.
 Worm   351 ITKFCNSSASFGIAICFGLLCLCDCSQRGAAIFLICLAMCFVSGYIPGYNTSAVTIAPGQTAAIA 415

  Fly   484 GISGGMGALPALLMPY------LEQLETDYKLVSSVRAAMWVI 520
            ..|...|.:.:.:.||      .:....::|:|.:|.||:.|:
 Worm   416 AFSRFWGQIASSVAPYHIGAYTKQGTADEWKIVFAVIAAICVV 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 39/165 (24%)
MFS_1 135..498 CDD:284993 79/407 (19%)
slc-17.7NP_505399.1 MFS 31..467 CDD:391944 104/538 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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