DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and vglu-2

DIOPT Version :10

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_499276.1 Gene:vglu-2 / 176441 WormBaseID:WBGene00010755 Length:573 Species:Caenorhabditis elegans


Alignment Length:437 Identity:94/437 - (21%)
Similarity:181/437 - (41%) Gaps:77/437 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 WPRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVR---QGGLYA 196
            |......::..:|:.||..|.:|.|.:|.::....:....||.:::|.::|...:.   ...::.
 Worm    93 WTGTEVGMMESSFFYGYAASQIPAGVIAAKFAPNKLFMLGILFASLLNIVTAICLNFHPFTDIFV 157

  Fly   197 LVAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLLIAEQDWPV 261
            :| ::::.|:..|.|:||:..:...|.|..||..||:...:|..:|:.:....|..|::...|..
 Worm   158 MV-IQVMQGLALGVCYPAMHGVWKYWAPPLERSKLATTTFTGASVGVMVGLPASAYLVSHFSWST 221

  Fly   262 FFYLVGGGAVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGEDGYEG 326
            .||:.|...:.|.:.:..|..::|:...:|.::|::||                .|..|....: 
 Worm   222 PFYVFGALGIVWSILWIYVSGTSPETHGYISADEKKYI----------------TEKVGSVAVK- 269

  Fly   327 EDREHRREVEATCNTAPWRSMLNSTPLWALVSTSMQQEFQ------QKLPQELQIALEEVRARGT 385
                     ..|..|.|||.|:.||.:||::..|..:.:.      .:|.....:...:::..| 
 Worm   270 ---------NMTLTTLPWRDMMTSTAVWAIIICSFCRSWSFFLLLGNQLTYMKDVLHIDIKNSG- 324

  Fly   386 SFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLCGSMYM------ 444
                    :..|.|.:|..|.:||:|:|||.|.....::....|:.::...|...::.:      
 Worm   325 --------LIAIFPQLGMCIVTLTSGQLSDYLRSSGKMSTEAVRKSVNTFGFTVEAVMLGCLAFV 381

  Fly   445 ---------LQIKMSGARIWSVLGMGAYYASIKLLPLDMSPNYAGTLMGISGGMGALP---ALLM 497
                     |.|..|||        ||..:...:...|::|.:|..||||:.|:||:.   .::.
 Worm   382 RDPVIAVTFLIIACSGA--------GAVLSGFNVNHFDIAPRHAPILMGIANGLGAIAGVGGIVT 438

  Fly   498 PYLEQLETD-----YKLVSSVRAAMWVIGASYISGDVQAF-NQPERE 538
            ..|.....|     :.|..|:.....:....:..|||..: .:||:|
 Worm   439 NSLTYQNPDGWQWVFLLAMSIDIFGIIFFLIFAKGDVLPWAREPEKE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 134..522 CDD:475125 88/418 (21%)
vglu-2NP_499276.1 MFS 51..458 CDD:475125 87/408 (21%)

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