DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and T27D12.1

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001254320.1 Gene:T27D12.1 / 174820 WormBaseID:WBGene00012085 Length:502 Species:Caenorhabditis elegans


Alignment Length:420 Identity:94/420 - (22%)
Similarity:165/420 - (39%) Gaps:74/420 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 TQSLVVMAFYA-GYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRL 202
            ||:.:.||..| ..:|.:.|..:|....|.:.|.:...:.|||.|||.|.::|. |.|..:|||.
 Worm    85 TQNSLAMAIVAIAALLGNFPIVQLVGMVGIRTVFAGLGILSAVSTLLIPLSIRM-GFYYFLAVRF 148

  Fly   203 LVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLLIAEQDWPVFFYLVG 267
            |.|......||.:.:..|:|...::.|:..|.:::..::...:....||.|.:...||..||..|
 Worm   149 LQGFAFAANFPVIGSFCAKWSYFKQNGLFVSSLVAYVQLSPAITMPASGALCSAFKWPSIFYAHG 213

  Fly   268 GGAVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGREREEMDGEDGYEGEDREHR 332
            ..::..|:.:.|...::|...||:.:.|.:.|          :.|:          ....|:...
 Worm   214 AVSLLLFVTYALFYRNSPQKHPFVGNVELKKI----------SIGK----------IAAVDKRAL 258

  Fly   333 REVEATCNTAPWRSMLNSTPLWAL--------VSTSMQQEFQQKLPQELQIALEEVRARGTSFSE 389
            ::|       |:..:|.:..:||:        ...:|...|.       .|.|.:|    ..|..
 Worm   259 KKV-------PYGPILKTPAIWAVWVAAIGNFTCVNMMFLFS-------PIYLSKV----LGFPV 305

  Fly   390 LTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLCGSMYMLQIKMSG--- 451
            .:|.|....|....:.:.|..|..||.|   ..|:.....||.:.|.|:..:.::..:...|   
 Worm   306 HSTGITAAIPPFLQFSSKLICGAASDRL---TCLSEGVKFRLFNTLAFVGSAGFLCVLAFMGDEH 367

  Fly   452 -ARIWSVLGMGAYYAS------IKLLPLDMSPNYAGTLMG-ISGGMGALPALLMPYL------EQ 502
             .....|||..|....      .|..|: :|..|:..:.| ||.|: .:..|::|:.      ..
 Worm   368 KRNNMIVLGCAAAMLGATTGGFFKAGPV-LSKQYSHFVTGNISLGI-TITMLIVPFFVNALTPNN 430

  Fly   503 LETDYKLVSSVRAAMWVIG----ASYISGD 528
            .:.::|.|..:..|:.||.    ..::.||
 Worm   431 TQEEWKYVFLITGAVMVITNIFFVIFVRGD 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 40/141 (28%)
MFS_1 135..498 CDD:284993 86/378 (23%)
T27D12.1NP_001254320.1 MFS 56..456 CDD:391944 92/414 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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