DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and T01H3.3

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_495657.2 Gene:T01H3.3 / 174270 WormBaseID:WBGene00011349 Length:616 Species:Caenorhabditis elegans


Alignment Length:430 Identity:90/430 - (20%)
Similarity:162/430 - (37%) Gaps:109/430 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 KGTRDREPAGEKRPGQEDSQERLS--CSEQWP-RQTQSLVVMAFYAGYVLSHVPGGRLAERYGGK 168
            |..||.|. |:.....|...|.:|  .:|..| |..:.|:..|...|.:........|.:::|.:
 Worm   164 KKLRDAED-GKSESIPEQLFENVSNEPTETLPLRLQRGLLFAASGLGVIFGSFVTINLIKKFGVR 227

  Fly   169 WVLSAAILTSAVLTLLTPTAVRQGGLYALVAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLAS 233
            .|.|..::.|.:|.||.....::..:: |:..|.|:|......||.:..||.||.|.:|:.:..:
 Worm   228 KVFSICMVQSTILILLFLYVQKRSYIF-LLLTRFLLGFSFSSVFPVMGNLLIQWGPLKEQLIFIT 291

  Fly   234 CVLSGGEIGITMVQLVSGLLIAEQDWPVFFYLVGGGAVAWFLGFTLVCYSTPDHCPFIQSEEREY 298
            .:.....||    .:||        ||:..|.                     |...|..:...|
 Worm   292 SMFMFLSIG----PVVS--------WPIAHYF---------------------HALEISLDSVYY 323

  Fly   299 IRCNTSNSFLLTTG---REREE----MDGED------GYEGEDREHRREVEATCNTAPWRSMLNS 350
            |:|.|.....|...   |:|.:    :.|.:      |...|.|.:|...:|      :.|:..|
 Worm   324 IQCGTLAFLTLIWSIFYRDRPQDHPWVSGVELNKIVAGKVNELRSNRALADA------YTSLFRS 382

  Fly   351 TPLWALVST-----SMQQEFQQKLPQEL---QIALEEVRARGTSFS----ELTTIIETIAPSVGN 403
            ...|::.::     |:...|...||..|   .:.:.|.....:||.    .|:.||         
 Worm   383 LSAWSIWTSAFGLFSVTAFFSIYLPSLLASPDVFVVEGLGIHSSFPFQLLPLSCII--------- 438

  Fly   404 WIASLTTGRLSDVLIEQQILTRTQTRRLMSWLVFLCGSMYMLQIKM-----SGARIWSVLGMGAY 463
             .:||      :||.:..    |:..|::::..|..|::.|:.|.:     :.|.::|:|     
 Worm   439 -FSSL------NVLFKPS----TKIVRILNFTAFAIGAILMIAIVLVASLQTKAGLFSLL----- 487

  Fly   464 YASIKLLPLDMSPNYAGTLMGISGGMGALPALLMPYLEQL 503
              .|.:||..::.        ::|.:.:|..:...:.||:
 Worm   488 --LISMLPFGLAI--------VAGFVRSLTVVGRVFAEQI 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 34/153 (22%)
MFS_1 135..498 CDD:284993 79/393 (20%)
T01H3.3NP_495657.2 MFS 200..564 CDD:119392 79/393 (20%)
MFS_1 200..508 CDD:284993 77/382 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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