DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and T19D12.9

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_495353.1 Gene:T19D12.9 / 174098 WormBaseID:WBGene00020583 Length:462 Species:Caenorhabditis elegans


Alignment Length:419 Identity:94/419 - (22%)
Similarity:152/419 - (36%) Gaps:106/419 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 SQERLSCSEQWPRQTQ--SLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTPT 187
            |::.:.....|...|.  |.:..|..||.::...|...|..::|.:.|||...|.:||.|||.|.
 Worm    54 SEQSVVNQTHWLENTADVSFIFSAGAAGAIIGLFPSVPLTTKFGVRNVLSFYGLLTAVSTLLIPL 118

  Fly   188 AVRQGGLYALVAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGL 252
            || ..|.|.::.:|:..|......|.|:.::...|.|..|.....:.:.:|.:|...::..|||:
 Worm   119 AV-SIGYYPVIIIRMFQGFGASILFSAIGSISEGWSPIAEISTYVAFLSAGFQISSIILMPVSGV 182

  Fly   253 LIAEQ-DWPVFFYLVGG-GAVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGRER 315
            |...| .|...|||.|| ..:|..:.||....|...|......|.|:     .|...|.|.||: 
 Worm   183 LCESQLGWRYIFYLFGGISVIAHIIFFTFFRDSATVHRNVSGKELRK-----ISTGRLPTAGRQ- 241

  Fly   316 EEMDGEDGYEGEDREHRREVEATCNTAPWRSMLNS---TPLWA---------------------- 355
                                     |.|:..:...   ..:||                      
 Worm   242 -------------------------TVPYLDICKDKVVLSIWAAAIGGNMSFMALITYGPTYLNK 281

  Fly   356 -LVSTSMQQEFQQKLPQELQIALEEVRARGTSFSELTTIIET-----------IAPSVGNWIASL 408
             |...:.:..|...:|..|..|::.|  .|.....:|.|.||           :..::|.::.:|
 Worm   282 VLGLDARETGFLNAIPYMLATAVKFV--AGPLSDHMTFIPETWRMIFFAALSQLGLAIGFFVMAL 344

  Fly   409 TTGRLSDVLIEQQILTRTQTRRLMSWLVFLCGSMYMLQIKMSG--AR-----IWSVLGMGAYYAS 466
            |..:    ||.|...|..         :.|.|...:..:|.:.  ||     :.:|:.:.| :.:
 Worm   345 TNSK----LIAQIAYTAA---------IVLAGINIVGVVKCAQMVARQHVHFVMAVISLSA-WGA 395

  Fly   467 IKLLPLDMS---PNYAG-------TLMGI 485
            |.|||:.:.   ||:..       |.:||
 Worm   396 IFLLPIIIGFVCPNHTASEWAVFYTAVGI 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 46/154 (30%)
MFS_1 135..498 CDD:284993 93/409 (23%)
T19D12.9NP_495353.1 MFS 23..427 CDD:391944 94/419 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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