DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18788 and F41C3.2

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_494849.2 Gene:F41C3.2 / 173821 WormBaseID:WBGene00018268 Length:499 Species:Caenorhabditis elegans


Alignment Length:540 Identity:110/540 - (20%)
Similarity:176/540 - (32%) Gaps:149/540 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LKAGK--EQPDLNQISAKGTRDRE--PAGEKR-PG------------------------------ 121
            |||.|  ...||:|.|     |.|  .|.:|: ||                              
 Worm     2 LKASKSISVEDLHQFS-----DEEYVEAKQKKIPGRMRWYICAIVTGLMTLVQANVHVYNFTVLC 61

  Fly   122 -QEDSQ----ERLSCSE---------QWPRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLS 172
             ||:.:    |.||.:|         .:.:..|.|:..|.|...:.|.:....|..|.|.|....
 Worm    62 MQEEQEKANNESLSRNETILPSSLNFNFSKFEQDLLFSAAYIAPLPSIIILYFLTNRSGVKTTFL 126

  Fly   173 AAILTSAVLTLLTPTAVRQGGLYALVAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLS 237
            ...:.|.:.|:|||.|. |.|.:...|.|...|:........|..:...|....|.|...|.:.:
 Worm   127 ICSMLSFLSTILTPIAT-QYGFWFFWAARFFQGLPTAILGIVVSVVTCHWSTLTENGTYVSILAA 190

  Fly   238 GGEIGITMVQLVSGLLIAEQDWPVFFYLVGGGAVAWFLGFTLVCYSTPDHCPFIQSEEREYIRCN 302
            ..:|...:...:|.|:.:...|...:|..|.......:.|.:.....|....|:...|.:.|   
 Worm   191 HYQIAPLLTMPLSALMCSVGGWSSVYYTQGTITAILIVLFAVFYTDKPSESKFVSKGELKAI--- 252

  Fly   303 TSNSFLLTTGREREEMDGEDGYEGEDREHRREVEATCNTAPWRSMLNSTPLWALVSTSMQ----- 362
                              |||...|::...:      :..|:.::.....:||:..||:.     
 Worm   253 ------------------EDGKSLEEKHVEK------SKTPFVAIHKDPAVWAIWITSVGGTIGF 293

  Fly   363 QEFQQKLPQELQIALEEVRARGTSFSELTTIIETIAPSVGNWIASLTTGRLS---DVLIEQ--QI 422
            ..|.|..|..|...|.        ::..||......|.:.:.||.:....||   ..|.|:  .|
 Worm   294 SIFLQYGPTYLNKVLH--------YNLSTTGWTAAVPYIFSCIARIVAQPLSANCSFLGERLAAI 350

  Fly   423 LTRTQTRRLMS--WLVF------------LCGSMYMLQIKMSGARIWSVLGMGAYYASIKLLPLD 473
            :|.|.::..|:  :||.            ||   |.|.|..:|..     |:|...::..:....
 Worm   351 VTTTISQGTMAICFLVLMFIPQTWSSVGQLC---YSLVIVANGLN-----GVGITRSAQLVCKQH 407

  Fly   474 MSPNYAGTLMGISGGMGALPALLMPYLEQLETD--------------------YKLVSSVRAAMW 518
            ||..|..... .:|.:|....||:.::...:|.                    :...||...|.|
 Worm   408 MSFVYTARAF-YNGSVGLFLPLLVNFVAPNDTHNEWTRLFLIIFCIVFVSNLIFIAFSSTEPAQW 471

  Fly   519 VIGASYISGDVQAFNQPERE 538
            .||.|.:.      |:.|::
 Worm   472 TIGTSEVD------NRSEQD 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 35/159 (22%)
MFS_1 135..498 CDD:284993 80/386 (21%)
F41C3.2NP_494849.2 2A0114euk 30..471 CDD:129972 92/485 (19%)
MFS 86..463 CDD:119392 81/421 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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