DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and slc-17.6

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_490947.2 Gene:slc-17.6 / 171781 WormBaseID:WBGene00017398 Length:546 Species:Caenorhabditis elegans


Alignment Length:440 Identity:93/440 - (21%)
Similarity:173/440 - (39%) Gaps:83/440 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 QWPRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTLLTP-TAVRQGGLYAL 197
            :|....|:.:..:||.|..::..|...||::.|.|.:||.|:|.:...:|||| :|:.....:.:
 Worm    69 EWSGDEQANIHTSFYIGAFIAVFPSEFLAKKLGPKNLLSFALLLNIFGSLLTPFSAIYLRSYFPV 133

  Fly   198 VAVRLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQLVSGLLIAE------ 256
            .|:||::|...|...||...|::.|.|..|:....:...:|.:|||.    ||..|.|:      
 Worm   134 AAIRLIMGFGYGFVIPAGSVLISSWFPLSEKSTAMAIFTTGNQIGIA----VSMFLTAKLCQLHF 194

  Fly   257 -QDWPVFFYLVG--GGA--VAWFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFLLTTGRERE 316
             :.||:.|.:.|  |..  |.|.:...    ..|....:|.:.|..||:                
 Worm   195 FEGWPLVFIVYGLIGAVFLVIWHVRLA----DKPRESKYITATELTYIK---------------- 239

  Fly   317 EMDGEDGYEGEDREHRRE--VEATCNTAPWRSMLNSTPLWALVSTSMQQEF-----QQKLPQELQ 374
                    .|:.|.:|.|  |.||    |:..::.:..:.|:.:.|..|.|     ...||:..|
 Worm   240 --------GGKQRRNRAETIVRAT----PYMKIILNGCVCAICACSFAQSFVLVALVTYLPKYNQ 292

  Fly   375 IALEEVRARGTSFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLMSWL---- 435
            ||.:........:|.|...|:.|...:...||.         .::|:.:..|...::.:.:    
 Worm   293 IAFKMNLTHNGIWSSLPFFIQMITKLLFAIIAD---------KVKQRKVNATAVTKVSNAIASFA 348

  Fly   436 --VFLCGSMY-------MLQIKMSGARIWSVLGMGAYYASIKLLPLDMSPNYAGTLMGISGGMGA 491
              :|:..:.|       ::|:.:    |.|:....||........:.::|.:...:...:.....
 Worm   349 SAIFIVIAAYGPFDSAELVQLSI----IVSMAAFSAYVPGYNTSIVTVAPQFTAFISSYAQLYAQ 409

  Fly   492 LPALLMPYLEQLETDYKLVSSVRAAMW-VIGASYISGDV-QAFNQPEREP 539
            :.:.|.|.:....|.:..:...:.|.: :.|...::|.: |.|.....||
 Worm   410 IASTLAPIVIGRITSHGTIYEWKCAFYSLAGVLAVTGLIFQIFGHGRTEP 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 45/157 (29%)
MFS_1 135..498 CDD:284993 84/394 (21%)
slc-17.6NP_490947.2 MFS 30..453 CDD:391944 90/432 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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