DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18788 and Slc17a1

DIOPT Version :9

Sequence 1:NP_652665.3 Gene:CG18788 / 59164 FlyBaseID:FBgn0042126 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_598238.2 Gene:Slc17a1 / 171080 RGDID:620099 Length:465 Species:Rattus norvegicus


Alignment Length:508 Identity:120/508 - (23%)
Similarity:207/508 - (40%) Gaps:104/508 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PKALP---NWRIELAMALNHTEYQLRSR----------LKAGKEQPDLNQISAKGTRDREPAGEK 118
            ||.:|   ::|..||:.|:.....:.::          :....|.|.|:..|.....|    ..|
  Rat     7 PKKVPGFCSFRYGLAILLHFCNIVIMAQRVCLNLTMVAMVNKTEPPHLSNKSVAEMLD----NVK 67

  Fly   119 RPGQEDSQERLSCSEQWPRQTQSLVVMAFYAGYVLSHVPGGRLAERYGGKWVLSAAILTSAVLTL 183
            .|           ...|....|.|::.:.:.|.|:..||.|.|:..|..|.::.:::..|:||:|
  Rat    68 NP-----------VHSWSLDIQGLILSSVFLGMVVIQVPVGYLSGAYPMKKIIGSSLFLSSVLSL 121

  Fly   184 LTPTAVRQGGLYALVAV-RLLVGICEGPCFPAVCALLAQWVPEQERGMLASCVLSGGEIGITMVQ 247
            |.|.|.:.|.  |||.| |:|.||.:|........:..:|.|..|||.|.|..|||..:|..:..
  Rat   122 LIPPAAQVGA--ALVIVCRVLQGIAQGAVSTGQHGIWVKWAPPLERGRLTSMTLSGFVMGPFIAL 184

  Fly   248 LVSGLLIAEQDWPVFFYLVG-GGAVA---WFLGFTLVCYSTPDHCPFIQSEEREYIRCNTSNSFL 308
            ||||.:.....||:.||:.| .|.|.   ||:.|    :..|::.|::.|.|::||     .|.|
  Rat   185 LVSGFICDLLGWPMVFYIFGIVGCVLSLFWFILF----FDDPNNHPYMSSSEKDYI-----TSSL 240

  Fly   309 LTTGREREEMDGEDGYEGEDREHRREVEATCNTAPWRSMLNSTPLWALVSTSMQQEFQQKL---- 369
            :                       ::|.:...:.|.::||.|.||||::..|....:...|    
  Rat   241 M-----------------------QQVHSGRQSLPIKAMLKSLPLWAIILNSFAFIWSNNLLVTY 282

  Fly   370 -PQELQIALE-EVRARGTSFSELTTIIETIAPSVGNWIASLTTGRLSDVLIEQQILTRTQTRRLM 432
             |..:...|. .||..|...|         .|.:..:|..:..|::||.|:.::|.:....|:|.
  Rat   283 TPTFISTTLHVNVRENGLLSS---------LPYLLAYICGIVAGQMSDFLLSRKIFSVVAVRKLF 338

  Fly   433 SWLVFLCGSMYMLQIKMSGARIWSVL--------GMGAYYASIKLLPLDMSPNYAG------TLM 483
            :.|...|..::::.:.......:|.:        .:...:....:..||::|.|.|      .|:
  Rat   339 TTLGIFCPVIFVVCLLYLSYNFYSTVIFLTLANSTLSFSFCGQLINALDIAPRYYGFLKAVTALI 403

  Fly   484 GISGGMGALPALLMPYLEQLETDYK------LVSSVRAAMWVIGASYISGDVQ 530
            ||.||:  :.:.|...:...:.:|.      |::.:..........:..||:|
  Rat   404 GIFGGL--ISSTLAGLILNQDPEYAWHKNFFLMAGINVTCLAFYLLFAKGDIQ 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18788NP_652665.3 MFS 129..>280 CDD:119392 53/155 (34%)
MFS_1 135..498 CDD:284993 101/387 (26%)
Slc17a1NP_598238.2 2A0114euk 1..464 CDD:129972 120/508 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D347586at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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