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Protein Alignment CG18787 and Nupl2

DIOPT Version :9

Sequence 1:	NP_652664.2	Gene:	CG18787 / 59163	FlyBaseID:	FBgn0042125	Length:	398	Species:	Drosophila melanogaster
Sequence 2:	NP_694732.3	Gene:	Nupl2 / 231042	MGIID:	2387631	Length:	420	Species:	Mus musculus

Alignment Length:	518	Identity:	90/518 - (17%)
Similarity:	143/518 - (27%)	Gaps:	222/518 - (42%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MVVCRFFQQGSCRYGAKCNNEH------------------------------------------- 22
            |.:|:||.||.||:|.:|.|||
Mouse     1 MTICQFFLQGRCRFGDRCWNEHPGARGAGGARQPPPQQQPPSGNNRRGWNASSQRYSNVIQPSSF 65

  Fly    23 ---------------------------------------------FDVKQYLKA---DMESSLNG 39
                                                         .|.|:.|:.   |:|...:.
Mouse    66 PKSTPWGGSRDQDKPPFGSFDSGASTSRGFGSSQNPFASPLSDEQKDEKKLLEGIVKDVEVWESS 130

  Fly    40 KMWPLSAYGPFKDKANFPNFIQDQSFEEVRFMCYEAKRQNQFEQFSQQFNREVLEANNKMKTM-- 102
            ..|..|.|.|.:.|.|...| .|.|.||:|...:.....|..:.:.....:.|.:..|::..:
Mouse   131 GQWMFSVYSPVRKKPNISGF-TDISPEELRLEYHNFLTSNNLQSYLNSVQQLVSQWRNRINELKN 194

  Fly   103 LQMSPQVLEMMIKIHETPEGGTVSAAPQQSSNPFAAAAPA--AANTSASIFGKPTLSAGNI---- 161
            |.||                 |..|......:..:.|.||  ..:..|..||.|.....|.
Mouse   195 LTMS-----------------TKGALLSDVKDGVSQAVPAFGFGSKQAGSFGSPGFPVNNSSSST 242

  Fly   162 ---FGNATSQA-----SNTNSIFG---------GTISNANARNSIFGVG--AAATGAQSVFGQPQ 207
               |...||..     |.:.|:||         ...|:.::....||:|  .|.:.|...|..|:
Mouse   243 VQNFSFKTSPGLATPPSGSTSVFGSHPAFGAGPSAGSSISSSTPAFGLGKPEATSAASFSFKSPE 307

  Fly   208 QQQLQPAAQAFQG--GNIFAQAQVQVQAQPV-NPNPFGGFQQQQQQPQSTGIFGQAASQNMGGMF 269
            ....  |:..|.|  .::.|.......|.|: :.:...||  ....|.|..:|.:.::...||
Mouse   308 GSSF--ASPGFSGFPASMAASPSGSTTAPPLRSGSSVAGF--GSPSPHSQAVFAKPSTDVFGG-- 366

  Fly   270 TQASQQLQQQQQAAASGLFAQAAASAFPNQQQMQQQQQMQQQQQMQQQQMHQQQQMQQQQMQQQQ 334
                           ||:.....||
Mouse   367 ---------------SGISTSVLAS---------------------------------------- 376

  Fly   335 QFQMQQQQQMMQQQQQQQAQPTNEIQSSVYSRMEDLNEQEIEAFKADQFLPGALPFKPPPRNL 397
                                  ....:::::..:.|.::|:|.|::.:|..|.:|.||||..|
Mouse   377 ----------------------GAADNALFTPRDQLMKEELEQFQSQRFTLGKIPLKPPPVEL 417

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.