DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ag3 and Cpr78Cb

DIOPT Version :9

Sequence 1:NP_652662.1 Gene:Lcp65Ag3 / 59159 FlyBaseID:FBgn0086611 Length:105 Species:Drosophila melanogaster
Sequence 2:NP_001262144.1 Gene:Cpr78Cb / 40353 FlyBaseID:FBgn0037068 Length:140 Species:Drosophila melanogaster


Alignment Length:118 Identity:38/118 - (32%)
Similarity:49/118 - (41%) Gaps:26/118 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLI--VFVALFAVALAAPAAEEPTIVR----SESD-------VGPES----FKYDWETSDGQAAQ 50
            |||  |.:||..|.:.|.......|.|    ||.|       |.|..    |||.::||:|...|
  Fly     4 FLIGMVLLALIWVEVDARLVRVRRIRRLVGASERDARITDFRVSPTDDEGVFKYAFKTSNGIDVQ 68

  Fly    51 AVGQLNDIGTENEAISVSGSYRFIADDGQTYQVNYIADKNGFQPEGAHLPVAP 103
            |.|         ..:...|.|.:.:.:|...:..||||:.||...|.|||..|
  Fly    69 AAG---------SPLETIGIYSYTSPEGVPIETRYIADELGFHVVGRHLPQPP 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65Ag3NP_652662.1 Chitin_bind_4 37..92 CDD:278791 16/54 (30%)
Cpr78CbNP_001262144.1 Chitin_bind_4 55..101 CDD:278791 16/54 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.