DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL36 and mocs3

DIOPT Version :9

Sequence 1:NP_652658.1 Gene:mRpL36 / 59151 FlyBaseID:FBgn0042112 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_956421.1 Gene:mocs3 / 393095 ZFINID:ZDB-GENE-040426-782 Length:459 Species:Danio rerio


Alignment Length:72 Identity:17/72 - (23%)
Similarity:25/72 - (34%) Gaps:36/72 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 RLKRRCKDCYIVVRQERGYVIC---PT----------------------HPRHKQMSMKKRDYKS 114
            ||:.|.|:|          |:|   ||                      |...::..:..:|||.
Zfish   289 RLRSRQKEC----------VVCGEKPTITELQDYEHFCGSAATDKCRRLHLLSREQRVSVQDYKG 343

  Fly   115 WILTHAT 121
             ||.|:|
Zfish   344 -ILDHST 349

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
mRpL36NP_652658.1 Ribosomal_L36 70..105 CDD:376334 10/54 (19%)
mocs3NP_956421.1 PRK07411 46..459 CDD:180967 17/72 (24%)