DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL36 and Uba3

DIOPT Version :9

Sequence 1:NP_652658.1 Gene:mRpL36 / 59151 FlyBaseID:FBgn0042112 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster


Alignment Length:76 Identity:15/76 - (19%)
Similarity:26/76 - (34%) Gaps:26/76 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SIQSSQLV----AATTGICQTSGLLTPGSTLVQQVAGFKVKGRLKRRCKDCYI-VVRQERGYVIC 96
            :|.:|.:|    ..|.|....:.::.||.|                .|.:|.: :...:..|.:|
  Fly   169 TIDTSSIVPMIDGGTEGFKGNARVILPGFT----------------ACIECTLDLFPPQVNYPLC 217

  Fly    97 -----PTHPRH 102
                 |..|.|
  Fly   218 TIANTPRLPEH 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL36NP_652658.1 Ribosomal_L36 70..105 CDD:376334 7/39 (18%)
Uba3NP_610913.1 ThiF 48..>220 CDD:279270 12/66 (18%)
Uba3_RUB 50..346 CDD:238765 15/76 (20%)
E2_bind 357..442 CDD:285976
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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