DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL36 and Uba1

DIOPT Version :9

Sequence 1:NP_652658.1 Gene:mRpL36 / 59151 FlyBaseID:FBgn0042112 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_001014102.1 Gene:Uba1 / 314432 RGDID:1359327 Length:1058 Species:Rattus norvegicus


Alignment Length:72 Identity:18/72 - (25%)
Similarity:28/72 - (38%) Gaps:23/72 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QGSRLWNGLSAARGFHL--------LTRPAAPAIVSIQSSQLVAATTGICQTSGLLTPGSTLVQQ 66
            ||:..|..||:.  |:|        ....:.|.:..:.|...|.|.||            .||:.
  Rat   104 QGTTQWADLSSQ--FYLREEDIGKNRAEVSQPRLAELNSYVPVTAYTG------------PLVED 154

  Fly    67 -VAGFKV 72
             ::||:|
  Rat   155 FLSGFQV 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL36NP_652658.1 Ribosomal_L36 70..105 CDD:376334 2/3 (67%)
Uba1NP_001014102.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46
Ube1 49..1055 CDD:273603 18/72 (25%)
2 approximate repeats. /evidence=ECO:0000255 63..611 18/72 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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