DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL36 and Uba6

DIOPT Version :9

Sequence 1:NP_652658.1 Gene:mRpL36 / 59151 FlyBaseID:FBgn0042112 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_001100683.1 Gene:Uba6 / 305268 RGDID:1308324 Length:1053 Species:Rattus norvegicus


Alignment Length:36 Identity:12/36 - (33%)
Similarity:19/36 - (52%) Gaps:7/36 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ARGFHLLTRPAAPAIVSIQSSQLVAATTG----ICQ 52
            |:||   ..|.|.|:..:.|.:::.|.||    :||
  Rat   383 AQGF---LPPLAAAVGGVASQEVLKAVTGKFSPLCQ 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL36NP_652658.1 Ribosomal_L36 70..105 CDD:376334
Uba6NP_001100683.1 Ube1 38..1046 CDD:273603 12/36 (33%)
Ube1_repeat1 43..428 CDD:238768 12/36 (33%)
E1_4HB 298..358 CDD:292809
Ube1_repeat2 462..1005 CDD:238767
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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