DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL36 and ula-1

DIOPT Version :9

Sequence 1:NP_652658.1 Gene:mRpL36 / 59151 FlyBaseID:FBgn0042112 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_001348740.1 Gene:ula-1 / 266650 WormBaseID:WBGene00006735 Length:543 Species:Caenorhabditis elegans


Alignment Length:94 Identity:22/94 - (23%)
Similarity:33/94 - (35%) Gaps:23/94 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RGFHLLTRPAAPAIVSIQSSQLVAATTG----IC--------QTSGLLTPGSTLVQQVAGFKVKG 74
            |.|...|.....::.||.||...:.:|.    ||        :.:.||....||....:......
 Worm   273 RAFQRTTFQIGSSVKSILSSPQCSTSTRPFWLICEALRRFVTENNNLLPLRGTLPDMTSDSSRYT 337

  Fly    75 RL-----KRRCKDCYIVVR------QERG 92
            ||     ::...|...|:|      :|||
 Worm   338 RLATLFHEKALSDAQEVLRLTREVEKERG 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL36NP_652658.1 Ribosomal_L36 70..105 CDD:376334 8/34 (24%)
ula-1NP_001348740.1 APPBP1_RUB 8..541 CDD:238770 22/94 (23%)
E1_enzyme_family <443..541 CDD:304554
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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