DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpL36 and mrpl36

DIOPT Version :9

Sequence 1:NP_652658.1 Gene:mRpL36 / 59151 FlyBaseID:FBgn0042112 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_001092727.1 Gene:mrpl36 / 100093703 ZFINID:ZDB-GENE-060503-821 Length:116 Species:Danio rerio


Alignment Length:92 Identity:34/92 - (36%)
Similarity:48/92 - (52%) Gaps:12/92 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LSAARGFHLLTRPAAP--AIVSIQ---SSQLVAATTGICQTSGLLTPGSTLVQQVAGFKVKGRLK 77
            :.|.|....:|..|.|  |:|:::   .:..::...|.||.  ||     .||..||.|.|..||
Zfish    29 VGAQRCLSTITAAAVPFRAVVNLKFKPHTAFLSPLLGRCQQ--LL-----CVQPSAGMKTKSALK 86

  Fly    78 RRCKDCYIVVRQERGYVICPTHPRHKQ 104
            :||.:|:.|.|:.|.:|.|..||||||
Zfish    87 KRCNECFFVRRRGRLFVFCKAHPRHKQ 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL36NP_652658.1 Ribosomal_L36 70..105 CDD:376334 18/35 (51%)
mrpl36NP_001092727.1 Ribosomal_L36 79..116 CDD:278851 18/35 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583978
Domainoid 1 1.000 46 1.000 Domainoid score I12151
eggNOG 1 0.900 - - E1_COG0257
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1640375at2759
OrthoFinder 1 1.000 - - FOG0003238
OrthoInspector 1 1.000 - - oto39139
orthoMCL 1 0.900 - - OOG6_102773
Panther 1 1.100 - - LDO PTHR46909
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1263
SonicParanoid 1 1.000 - - X4252
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.740

Return to query results.
Submit another query.