DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18766 and emb2746

DIOPT Version :10

Sequence 1:NP_652657.1 Gene:CG18766 / 59150 FlyBaseID:FBgn0042111 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_201147.2 Gene:emb2746 / 836461 AraportID:AT5G63420 Length:911 Species:Arabidopsis thaliana


Alignment Length:193 Identity:32/193 - (16%)
Similarity:58/193 - (30%) Gaps:65/193 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PMSQQEFNSNNTEGFYKTEYGMHRHFMDHSQPPPNAGSVDNFMASSAAVAAVAAAASARLADNNM 197
            |.|.|.|:|:.:...|.          |..:|......:..|.|.|..........|:|:.....
plant     4 PASLQGFSSHASSSIYS----------DVRRPATTPSKMAAFSALSLCPYTFTFRQSSRIKSTVS 58

  Fly   198 DQQMNTAAGGSGGSGGGGGNTNG-----GVANYQKIKKSHE------------------------ 233
            ....:..|.|:..|.......:|     |.:....:|:..|                        
plant    59 CSVTSAPASGTSSSSKTPRRRSGRLEGVGKSMEDSVKRKMEQFYEGTDGPPLRILPIGGLGEIGM 123

  Fly   234 ------DYDKFVDIVKNIVDTHKSTPD-------KV--DTFGDFIKSYMKRWPERLQDEAINH 281
                  :||:::     ::|.....||       |:  ||      .:::||..:::...|.|
plant   124 NCMLVGNYDRYI-----LIDAGIMFPDYDEPGIQKIMPDT------GFIRRWKHKIEAVVITH 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18766NP_652657.1 Myb_DNA-bind_4 10..93 CDD:463994
emb2746NP_201147.2 RnjA 108..664 CDD:440360 12/79 (15%)
GT1 819..884 CDD:213402
Blue background indicates that the domain is not in the aligned region.

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