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Protein Alignment CG18754 and CG34436

DIOPT Version :9

Sequence 1:	NP_652652.3	Gene:	CG18754 / 59145	FlyBaseID:	FBgn0042106	Length:	341	Species:	Drosophila melanogaster
Sequence 2:	NP_001097954.1	Gene:	CG34436 / 5740743	FlyBaseID:	FBgn0085465	Length:	270	Species:	Drosophila melanogaster

Alignment Length:	281	Identity:	77/281 - (27%)
Similarity:	117/281 - (41%)	Gaps:	63/281 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    83 CCPELGDVLPNK-------QTCGQTTPVFRDRGAENAELNEYPWMVLLLYENRL---SLIR--YV 135
            |...|..:|.|:       |.|.:.:.:      .|..:...|||.|:|..|:.   :||.  :|
  Fly     6 CLAVLSWMLANQGSAQLLDQNCAEVSRL------SNDIIFSRPWMALVLLPNKTCSGALIHKYFV 64

  Fly   136 LTAAHCVIGGYLTQNDLVLKSVRLGESTTDCITSESRCPHL------DVEVGQTTVHQGFTSSGG 194
            :|:|.||    ..|...:   ||||:.:   |..|    |:      |..|....:|:.:..|
  Fly    65 ITSASCV----FNQERAI---VRLGQLS---IKQE----HIVSYSSDDYHVQSAYIHRFYEKS-- 113

  Fly   195 TYRNDIALLRLQFPVRYTKKIQPICL-LDAEFPLQDLNLQIS--------GWDPTKSSQTLITST 250
            .:.:|||||.||..|.|...|:|||| ||.    .|::.|:.        |.|.........||.
  Fly   114 NFEHDIALLELQNDVLYKAHIRPICLWLDK----SDIDTQMFKRYETFRWGIDEKYILPAAKTSK 174

  Fly   251 VKERNPADCLNRYPSFRSASQVCAGGQRKGDTCAGISGSPVMGIMGSGVDEFVFLAGIASYGQ-Q 314
            :|..:...|.|.:..:...|.:|||.:.| ..|.. :|||:...:.........|.||.|||: :
  Fly   175 IKHISQVKCENAFKLYPQNSHICAGYKNK-SKCVE-TGSPLFKKIRYYTKIRYTLFGIQSYGESR 237

  Fly   315 YCYSAGIPGVYTKIGHFSEWI 335
            .|       :||.:..:.:||
  Fly   238 TC-------LYTDVTKYIDWI 251

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.