DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18754 and CLIPB18

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_001238237.1 Gene:CLIPB18 / 4578288 VectorBaseID:AGAP009215 Length:359 Species:Anopheles gambiae


Alignment Length:364 Identity:99/364 - (27%)
Similarity:151/364 - (41%) Gaps:54/364 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILVLLQAIFFNQLAECVRLSSCQKDEKCTRLVSCSPLMNILRPRGMTQAEKDVFAHRQCGLD-PN 72
            ::|....|..:|..:|....:|....:|.|.   .|  :...|...|:...:.|..:.|..: .|
Mosquito    15 LIVPFCQIVVSQFHQCTGGETCININECPRF---GP--HYHEPAKWTEELLNEFRSKVCKREQSN 74

  Fly    73 GHELLHMVYVCCPELGDVLPNKQTCGQTTPVFRDRGA---------ENAELNEYPWMVLLLYENR 128
            |..|..   |||........|.:..|..|....:.||         :.|.|.::|||.||:. |.
Mosquito    75 GRNLYK---VCCKRAATGNKNNRERGLATLDLEECGAYSADRMAYGQEARLFQFPWMALLML-NS 135

  Fly   129 LSLI--------RYVLTAAHCVIGGYLTQNDLVLKSVRLGE---STT---DCITSESRCPHLDVE 179
            :..:        |||||||||:....:|       :|||||   ||.   |....:...|..|:.
Mosquito   136 VKFVCGGTLINRRYVLTAAHCLKNTQVT-------TVRLGEFDISTPIDYDKRGDQHAPPPQDIA 193

  Fly   180 VGQTTVHQGFTSSGGTYRNDIALLRLQFPVRYTKKIQPICL-LDAEFPLQDLNLQISGWDPTKS- 242
            :.||.||:.:::.  ...|||.|:|:.....|...:.|||| :............::||..|:| 
Mosquito   194 IEQTIVHEAYSTR--LKVNDIGLIRMAEEAAYNDNVSPICLPVSPAMRTTQTTYFVAGWGATESA 256

  Fly   243 --SQTLITSTVKERNPADC---LNRYPSFRSAS--QVCAGGQRKGDTCAGISGSPVMGIMGSGVD 300
              |..|:...|.......|   |.|..|:...:  |:||.|....|.|.|.||.|:..|   .::
Mosquito   257 FYSNRLLFGKVALLTNDQCAQHLLRVDSYTKINNDQMCAIGANLTDNCTGDSGGPLKTI---SIN 318

  Fly   301 EFVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWIKANL 339
            ......|:.|.|.:.|.....|||||::.::::||..:|
Mosquito   319 ARYVQYGVVSLGLRTCGKQSAPGVYTRVENYADWILEHL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855 11/49 (22%)
Tryp_SPc 108..338 CDD:238113 77/261 (30%)
Tryp_SPc 108..335 CDD:214473 75/258 (29%)
CLIPB18XP_001238237.1 Tryp_SPc 117..356 CDD:238113 75/251 (30%)
Tryp_SPc 117..353 CDD:214473 73/248 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D402896at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24260
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.