DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18754 and CLIPA19

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_001237509.2 Gene:CLIPA19 / 4577382 VectorBaseID:AGAP003245 Length:356 Species:Anopheles gambiae


Alignment Length:338 Identity:94/338 - (27%)
Similarity:153/338 - (45%) Gaps:61/338 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KCTRLVSCSPLMNILRPRGMTQAEKDVFAHRQCGLDPNGHELLHMVYVCCPELGDVLPNKQTCG- 98
            ||...:.|.||     ||.:: .:.:...:.||    |..|.  ..::|||:...|||....|| 
Mosquito    46 KCIYFLDCKPL-----PRALS-TDLNFLKNSQC----NQKEA--PGFICCPDKRHVLPEPPHCGV 98

  Fly    99 ----QTTPVFRDRGAENAELNEYPWMVLLLYEN---------RLSLIR--YVLTAAHCVI---GG 145
                |.|      ||:..:.::|||..|:.||.         ..:||.  ::|||||||.   .|
Mosquito    99 RAATQLT------GAQLTQPDDYPWTALIEYEKPDGTTGFHCGGTLINQGHILTAAHCVSSLRAG 157

  Fly   146 YLTQNDLVLKSVRLGE----STTDCITSESRCPHLDVEVGQTTVHQGFTSSGGTYRNDIALLRLQ 206
            :....      |.|||    |..||..:....|.::.:|.:..||.|:.:..|::.:||||:|.:
Mosquito   158 WKVHR------VLLGEWDLSSVLDCAYNVCNNPPIEAKVSKIIVHDGYDAQNGSFNHDIALIRFE 216

  Fly   207 FPVRYTKKIQPICLLDAE-FPLQDLN---LQISGWDPTKSSQTL---ITSTVKERNPADC--LNR 262
            ....:...|.||||..|: .|.:::.   ..:.||..::|:..:   :...:|.||..:|  |..
Mosquito   217 ELANFPDTIVPICLPIADSIPWENITDGFSTVVGWGKSQSTAGVTKKLKLNLKVRNFRECSSLLE 281

  Fly   263 YPSFRSASQVCAGGQRKG-DTCAGISGSPVMGIMGSGVDEFVFLAGIASYGQQYCYSAGIPGVYT 326
            :|.....||:||..:|.. ..|:..:|    |.:......|.:|.|:|...:|.|.|..:|||:.
Mosquito   282 WPEKMQPSQLCALWERSNRKICSADAG----GGLAWFYRRFHYLIGVAGSDEQKCGSGDVPGVFV 342

  Fly   327 KIGHFSEWIKANL 339
            .:.::..||:.|:
Mosquito   343 NVSYYMNWIRDNI 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855 11/48 (23%)
Tryp_SPc 108..338 CDD:238113 72/257 (28%)
Tryp_SPc 108..335 CDD:214473 70/254 (28%)
CLIPA19XP_001237509.2 CLIP 37..84 CDD:197829 12/49 (24%)
Tryp_SPc 106..354 CDD:238113 72/257 (28%)
Tryp_SPc 106..351 CDD:214473 70/254 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D402896at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.880

Return to query results.
Submit another query.