DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18754 and CG11836

DIOPT Version :9

Sequence 1:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster


Alignment Length:258 Identity:89/258 - (34%)
Similarity:130/258 - (50%) Gaps:34/258 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 CGQTTPVFRDRGAENAELNEYPWMVLLLYENRL----SLIR--YVLTAAHCVIGGYLTQNDLVLK 155
            ||.:....|..|.:...:|:||||..::|:.:.    ||:.  |||:|||||       ..|...
  Fly    88 CGFSNEEIRIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSAAHCV-------KKLRKS 145

  Fly   156 SVRL--GESTTDCITSESRCPHLDVEVGQTTV--HQGFTSSGGTYRNDIALLRLQFPVRYTKKIQ 216
            .:|:  |:...: |||||:.    ::...|.|  |:.|...  ||.||||||||:.|:.::|.|:
  Fly   146 KIRVIFGDHDQE-ITSESQA----IQRAVTAVIKHKSFDPD--TYNNDIALLRLRKPISFSKIIK 203

  Fly   217 PICLLDAEFPLQDLNLQISGWDPTKSSQTL--ITSTVKE--RNPADCLN-RYPSFRSASQVCAGG 276
            ||||....:........:.||..|.....|  |.:.||.  .:..:|.| ||.|.|..|.:...|
  Fly   204 PICLPRYNYDPAGRIGTVVGWGRTSEGGELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLCAG 268

  Fly   277 QRKGDTCAGISGSPVMGIMGSGVDEFVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWIKANL 339
            :...|:|.|.||.|:  ::.:||.  .|:.||.|:|.. |...|.||||:::..|..|||:||
  Fly   269 RPSMDSCQGDSGGPL--LLSNGVK--YFIVGIVSWGVG-CGREGYPGVYSRVSKFIPWIKSNL 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18754NP_652652.3 CLIP 35..84 CDD:288855
Tryp_SPc 108..338 CDD:238113 84/244 (34%)
Tryp_SPc 108..335 CDD:214473 81/241 (34%)
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 84/246 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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